Stanley K Burt
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Explore the profile of Stanley K Burt including associated specialties, affiliations and a list of published articles.
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Articles
15
Citations
365
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Recent Articles
1.
Nemukhin A, Topol I, Burt S
J Chem Theory Comput
. 2015 Dec;
2(2):292-9.
PMID: 26626517
We present the results of modeling spectral properties of the chromophore, 2-acetyl-4-(p-hydroxybenzylidene)-1-methyl-5-imidazolone (AHBMI), from the newly discovered fluorescent protein asFP595 in different solvents and compare computational and recent experimental data....
2.
Grigorenko B, Rogov A, Topol I, Burt S, Martinez H, Nemukhin A
Proc Natl Acad Sci U S A
. 2007 Apr;
104(17):7057-61.
PMID: 17438284
The intrinsic chemical reaction of adenosine triphosphate (ATP) hydrolysis catalyzed by myosin is modeled by using a combined quantum mechanics and molecular mechanics (QM/MM) methodology that achieves a near ab...
3.
Grigorenko B, Nemukhin A, Shadrina M, Topol I, Burt S
Proteins
. 2006 Nov;
66(2):456-66.
PMID: 17094109
The hydrolysis reaction of guanosine triphosphate (GTP) by p21(ras) (Ras) has been modeled by using the ab initio type quantum mechanical-molecular mechanical simulations. Initial geometry configurations have been prompted by...
4.
Habermann J, Roblick U, Luke B, Prieto D, Finlay W, Podust V, et al.
Gastroenterology
. 2006 Oct;
131(4):1020-9.
PMID: 17030172
Background & Aims: Late diagnosis of colorectal carcinoma results in a significant reduction of average survival times. Yet despite screening programs, about 70% of tumors are detected at advanced stages...
5.
Topol I, Nemukhin A, Salnikow K, Cachau R, Abashkin Y, Kasprzak K, et al.
J Phys Chem A
. 2006 Mar;
110(12):4223-8.
PMID: 16553373
Enzymatic hydroxylation reactions carried out by 2-oxoglutarate (2OG) dependent iron-containing oxygenases were recently implicated in oxygen sensing. In addition to oxygen depletion, two metals, cobalt and nickel, are capable of...
6.
Grigorenko B, Nemukhin A, Cachau R, Topol I, Burt S
J Mol Model
. 2005 Jul;
11(6):503-8.
PMID: 16052311
The structures of the complexes between Ras*GDP bound to RasGAP in the presence of three probable gamma-phosphate analogs (AlF3, AlF4- and MgF3-) for the transition state (TS) of the hydrolysis...
7.
Zeeberg B, Qin H, Narasimhan S, Sunshine M, Cao H, Kane D, et al.
BMC Bioinformatics
. 2005 Jul;
6:168.
PMID: 15998470
Background: We previously developed GoMiner, an application that organizes lists of 'interesting' genes (for example, under-and overexpressed genes from a microarray experiment) for biological interpretation in the context of the...
8.
Grigorenko B, Nemukhin A, Topol I, Cachau R, Burt S
Proteins
. 2005 May;
60(3):495-503.
PMID: 15906320
The mechanism of the hydrolysis reaction of guanosine triphosphate (GTP) by the protein complex Ras-GAP (p21(ras) - p120(GAP)) has been modeled by the quantum mechanical-molecular mechanical (QM/MM) and ab initio...
9.
Abashkin Y, Burt S
Inorg Chem
. 2005 Mar;
44(5):1425-32.
PMID: 15732983
We present the results of the first theoretical investigation of salen-manganese complexes as synthetic catalytic scavengers of hydrogen peroxide molecules that mimic catalase enzymes. Catalase mimics can be used as...
10.
Van Q, Klose J, Lucas D, Prieto D, Luke B, Collins J, et al.
Dis Markers
. 2004 Jul;
19(4-5):169-83.
PMID: 15258332
The advent of systems biology approaches that have stemmed from the sequencing of the human genome has led to the search for new methods to diagnose diseases. While much effort...