Shuichi Kawashima
Overview
Explore the profile of Shuichi Kawashima including associated specialties, affiliations and a list of published articles.
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Articles
42
Citations
8163
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Recent Articles
1.
Ikeda S, Aoki-Kinoshita K, Chiba H, Goto S, Hosoda M, Kawashima S, et al.
J Biomed Semantics
. 2025 Jan;
16(1):1.
PMID: 39780290
Background: TogoID ( https://togoid.dbcls.jp/ ) is an identifier (ID) conversion service designed to link IDs across diverse categories of life science databases. With its ability to obtain IDs related in...
2.
Mitsuhashi N, Toyo-Oka L, Katayama T, Kawashima M, Kawashima S, Miyazaki K, et al.
Hum Genome Var
. 2022 Dec;
9(1):44.
PMID: 36509753
TogoVar ( https://togovar.org ) is a database that integrates allele frequencies derived from Japanese populations and provides annotations for variant interpretation. First, a scheme to reanalyze individual-level genome sequence data...
3.
Ikeda S, Ono H, Ohta T, Chiba H, Naito Y, Moriya Y, et al.
Bioinformatics
. 2022 Jul;
38(17):4194-4199.
PMID: 35801937
Motivation: Understanding life cannot be accomplished without making full use of biological data, which are scattered across databases of diverse categories in life sciences. To connect such data seamlessly, identifier...
4.
Lawson J, Cabili M, Kerry G, Boughtwood T, Thorogood A, Alper P, et al.
Cell Genom
. 2021 Nov;
1(2):None.
PMID: 34820659
Human biomedical datasets that are critical for research and clinical studies to benefit human health also often contain sensitive or potentially identifying information of individual participants. Thus, care must be...
5.
Runtuwene L, Kawashima S, Pijoh V, Tuda J, Hayashida K, Yamagishi J, et al.
Int J Mol Sci
. 2020 Oct;
21(20).
PMID: 33053895
Efforts to determine the mosquito genes that affect dengue virus replication have identified a number of candidates that positively or negatively modify amplification in the invertebrate host. We used deep...
6.
Vos R, Katayama T, Mishima H, Kawano S, Kawashima S, Kim J, et al.
F1000Res
. 2020 Apr;
9:136.
PMID: 32308977
We report on the activities of the 2015 edition of the BioHackathon, an annual event that brings together researchers and developers from around the world to develop tools and technologies...
7.
Katayama T, Kawashima S, Okamoto S, Moriya Y, Chiba H, Naito Y, et al.
Database (Oxford)
. 2019 Jan;
2019.
PMID: 30624651
TogoGenome is a genome database that is purely based on the Semantic Web technology, which enables the integration of heterogeneous data and flexible semantic searches. All the information is stored...
8.
Kawashima S, Katayama T, Hatanaka H, Kushida T, Takagi T
Database (Oxford)
. 2018 Dec;
2018.
PMID: 30576482
In the life sciences, researchers increasingly want to access multiple databases in an integrated way. However, different databases currently use different formats and vocabularies, hindering the proper integration of heterogeneous...
9.
Yamagishi J, Natori A, Tolba M, Mongan A, Sugimoto C, Katayama T, et al.
Genome Res
. 2018 Aug;
28(8):1253.
PMID: 30068583
No abstract available.
10.
Ohta T, Kawashima T, Shinozaki N, Dobashi A, Hiraoka S, Hoshino T, et al.
J Plant Res
. 2018 Feb;
131(4):709-717.
PMID: 29460198
Recent studies have shown that environmental DNA is found almost everywhere. Flower petal surfaces are an attractive tissue to use for investigation of the dispersal of environmental DNA in nature...