Shiro Yoshioka
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Explore the profile of Shiro Yoshioka including associated specialties, affiliations and a list of published articles.
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Articles
34
Citations
440
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Recent Articles
1.
Yoshioka S, Newell P
PeerJ
. 2016 Jan;
4:e1543.
PMID: 26788425
Pseudomonas fluorescens Pf0-1 is one of the model organisms for biofilm research. Our previous transposon mutagenesis study suggested a requirement for the de novo purine nucleotide biosynthesis pathway for biofilm...
2.
Newell P, Yoshioka S, Hvorecny K, Monds R, OToole G
J Bacteriol
. 2011 Jul;
193(18):4685-98.
PMID: 21764921
Cyclic di-GMP (c-di-GMP) is a broadly conserved, intracellular second-messenger molecule that regulates biofilm formation by many bacteria. The synthesis of c-di-GMP is catalyzed by diguanylate cyclases (DGCs) containing the GGDEF...
3.
Sawai H, Yoshioka S, Uchida T, Hyodo M, Hayakawa Y, Ishimori K, et al.
Biochim Biophys Acta
. 2009 Oct;
1804(1):166-72.
PMID: 19818878
We have studied the structural and enzymatic properties of a diguanylate cyclase from an obligatory anaerobic bacterium Desulfotalea psychrophila, which consists of the N-terminal sensor domain and the C-terminal diguanylate...
4.
El-Mashtoly S, Gu Y, Yoshimura H, Yoshioka S, Aono S, Kitagawa T
J Biol Chem
. 2007 Dec;
283(11):6942-9.
PMID: 18162468
HemAT from Bacillus subtilis (HemAT-Bs) is a heme-based O2 sensor protein that acts as a signal transducer responsible for aerotaxis. HemAT-Bs discriminates its physiological effector (O2) from other gas molecules...
5.
Yoshimura H, Yoshioka S, Mizutani Y, Aono S
Biochem Biophys Res Commun
. 2007 Apr;
357(4):1053-7.
PMID: 17459338
HemAT-Bs is the heme-based O(2) sensor responsible for aerotaxis control in Bacillus subtilis. In this study, we measured the time-resolved resonance Raman spectra of full-length HemAT-Bs wild-type (WT) and Y133F...
6.
Takahashi Y, Iida K, Takahashi K, Yoshioka S, Fukuoka H, Takeno R, et al.
Gastroenterology
. 2007 Feb;
132(3):938-43.
PMID: 17324404
Background And Aims: Nonalcoholic steatohepatitis (NASH) is an emerging progressive hepatic disease and demonstrates steatosis, inflammation, and fibrosis. Insulin resistance is a common feature in the development of NASH. Molecular...
7.
Komori H, Inagaki S, Yoshioka S, Aono S, Higuchi Y
J Mol Biol
. 2007 Feb;
367(3):864-71.
PMID: 17292914
CooA is a CO-dependent transcriptional activator and transmits a CO-sensing signal to a DNA promoter that controls the expression of the genes responsible for CO metabolism. CooA contains a b-type...
8.
Kobayashi K, Kubo M, Yoshioka S, Kitagawa T, Kato Y, Asano Y, et al.
Chembiochem
. 2006 Sep;
7(12):2004-9.
PMID: 17009275
Phenylacetaldoxime dehydratase from Bacillus sp. OxB-1 (OxdB) contains a heme that acts as the active site for the dehydration reaction of aldoxime. Ferrous heme is the active form, in which...
9.
Pinakoulaki E, Yoshimura H, Daskalakis V, Yoshioka S, Aono S, Varotsis C
Proc Natl Acad Sci U S A
. 2006 Sep;
103(40):14796-801.
PMID: 17003124
We have identified a ligand (CO) accommodation cavity in the signal transducer sensor protein HemAT (heme-based aerotactic transducer) that allows us to gain single-molecule insights into the mechanism of gas...
10.
Yoshimura H, Yoshioka S, Kobayashi K, Ohta T, Uchida T, Kubo M, et al.
Biochemistry
. 2006 Jul;
45(27):8301-7.
PMID: 16819829
HemAT from Bacillus subtilis (HemAT-Bs) is a heme-based O2 sensor protein that acts as a signal transducer responsible for aerotaxis. HemAT-Bs discriminates its physiological effector, O2, from other gas molecules...