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Shahin S Ali

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Articles 24
Citations 253
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Recent Articles
1.
Baruah I, Shao J, Ali S, Schmidt M, Meinhardt L, Bailey B, et al.
Sci Rep . 2024 Feb; 14(1):4175. PMID: 38378988
The oomycete Phytophthora palmivora infects the fruit of cacao trees (Theobroma cacao) causing black pod rot and reducing yields. Cacao genotypes vary in their resistance levels to P. palmivora, yet...
2.
Minio A, Figueroa-Balderas R, Cohen S, Ali S, Carriel D, Britto D, et al.
G3 (Bethesda) . 2023 Jun; 13(9). PMID: 37337677
The basidiomycete Moniliophthora roreri causes frosty pod rot of cacao (Theobroma cacao) in the western hemisphere. Moniliophthora roreri is considered asexual and haploid throughout its hemibiotrophic life cycle. To understand...
3.
Kronmiller B, Feau N, Shen D, Tabima J, Ali S, Armitage A, et al.
Mol Plant Microbe Interact . 2022 Oct; 36(1):26-46. PMID: 36306437
species are oomycete plant pathogens that cause great economic and ecological impacts. The genus includes over 180 known species, infecting a wide range of plant hosts, including crops, trees, and...
4.
Baruah I, Ali S, Shao J, Lary D, Bailey B
Front Plant Sci . 2022 Feb; 12:780805. PMID: 35211126
Black pod rot, caused by , is a devastating disease of L. (cacao) leading to huge losses for farmers and limiting chocolate industry supplies. To understand resistance responses of cacao...
5.
Ali S, Amoako-Attah I, Shao J, Kumi-Asare E, Meinhardt L, Bailey B
Front Microbiol . 2021 Nov; 12:752094. PMID: 34777305
Thread blight disease has recently been described as an emerging disease on cacao () in Ghana. In Ghana, thread blight disease is caused by multiple species of the family: ,...
6.
Morales-Cruz A, Ali S, Minio A, Figueroa-Balderas R, Garcia J, Kasuga T, et al.
G3 (Bethesda) . 2020 May; 10(7):2241-2255. PMID: 32354704
and are oomycete pathogens that cause black pod rot of cacao (), the most economically important disease on cacao globally. While is a cosmopolitan pathogen, , which is more aggressive...
7.
Ali S, Asman A, Shao J, Firmansyah A, Susilo A, Rosmana A, et al.
Fungal Biol Biotechnol . 2019 Oct; 6:14. PMID: 31583107
Background: , a member of the family, is the causal agent of vascular-streak dieback (VSD) of cacao, a major threat to the chocolate industry in the South-East Asia. The fastidious...
8.
Ali S, Asman A, Shao J, Balidion J, Strem M, Puig A, et al.
Genome . 2019 Oct; 63(1):37-52. PMID: 31580730
(Pat.) Griffon & Maubl., a member of the family Botryosphaeriaceae, is becoming a significant threat to crops and woody plants in many parts of the world, including the major cacao...
9.
Nugent B, Ali S, Mullins E, Doohan F
Front Microbiol . 2019 Mar; 10:295. PMID: 30863378
is a leading microbial agent in the emerging consolidated bioprocessing (CBP) industry owing to its capability to infiltrate the plant's lignin barrier and degrade complex carbohydrates to value-added chemicals such...
10.
Gunupuru L, Perochon A, Ali S, Scofield S, Doohan F
Methods Mol Biol . 2018 Nov; 1900:95-114. PMID: 30460561
With the recent advances in sequencing technologies, many studies are generating lists of candidate genes associated with specific traits. The major bottleneck in functional genomics is the validation of gene...