Saskia Hiltemann
Overview
Explore the profile of Saskia Hiltemann including associated specialties, affiliations and a list of published articles.
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24
Citations
2150
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Recent Articles
1.
Royaux C, Mihoub J, Josse M, Pelletier D, Norvez O, Reecht Y, et al.
Gigascience
. 2025 Feb;
14.
PMID: 39937595
Numerous conceptual frameworks exist for best practices in research data and analysis (e.g., Open Science and FAIR principles). In practice, there is a need for further progress to improve transparency,...
2.
Strepis N, Dollee D, Vrins D, Vanneste K, Bogaerts B, Carrillo C, et al.
BMC Genomics
. 2025 Jan;
26(1):27.
PMID: 39794695
Background: The Joint Programming Initiative on Antimicrobial Resistance (JPIAMR) networks 'Seq4AMR' and 'B2B2B AMR Dx' were established to promote collaboration between microbial whole genome sequencing (WGS) and antimicrobial resistance (AMR)...
3.
Goclowski C, Jakiela J, Collins T, Hiltemann S, Howells M, Loach M, et al.
Gigascience
. 2025 Jan;
14.
PMID: 39775842
Background: Bioinformatics is fundamental to biomedical sciences, but its mastery presents a steep learning curve for bench biologists and clinicians. Learning to code while analyzing data is difficult. The curve...
4.
Nasr E, Amato P, Bhardwaj A, Blankenberg D, Brites D, Cumbo F, et al.
bioRxiv
. 2025 Jan;
PMID: 39764050
Microbial research generates vast and complex data from diverse omics technologies, necessitating innovative analytical solutions. microGalaxy (Galaxy for Microbiology) addresses these needs with a user-friendly platform that integrates >220 tool...
5.
Petroll R, Varshney D, Hiltemann S, Finke H, Schreiber M, de Vries J, et al.
Plant J
. 2024 Dec;
121(1):e17184.
PMID: 39666589
Transcription-associated proteins (TAPs) fulfill multiple functions in regulatory and developmental processes and display lineage-specific evolution. TAPscan is a comprehensive and highly reliable tool for genome-wide TAP annotation via domain profiles....
6.
Frohn S, Haas F, Chavez B, Dreyer B, Reiss E, Ziplys A, et al.
Plant Cell Environ
. 2024 Oct;
PMID: 39400938
After an initial evolution in a reducing environment, life got successively challenged by reactive oxygen species (ROS), especially during the great oxidation event (GOE) that followed the development of photosynthesis....
7.
Ouwerkerk J, Rasche H, Spalding J, Hiltemann S, Stubbs A
Gigascience
. 2024 Jan;
13.
PMID: 38280189
Background: In clinical research, data have to be accessible and reproducible, but the generated data are becoming larger and analysis complex. Here we propose a platform for Findable, Accessible, Interoperable,...
8.
Rasche H, Hyde C, Davis J, Gladman S, Coraor N, Bretaudeau A, et al.
Gigascience
. 2023 Jul;
12.
PMID: 37395629
Background: Hands-on training, whether in bioinformatics or other domains, often requires significant technical resources and knowledge to set up and run. Instructors must have access to powerful compute infrastructure that...
9.
Hiltemann S, Rasche H, Gladman S, Hotz H, Lariviere D, Blankenberg D, et al.
PLoS Comput Biol
. 2023 Jan;
19(1):e1010752.
PMID: 36622853
There is an ongoing explosion of scientific datasets being generated, brought on by recent technological advances in many areas of the natural sciences. As a result, the life sciences have...
10.
van der Velde K, Singh G, Kaliyaperumal R, Liao X, de Ridder S, Rebers S, et al.
Sci Data
. 2022 Apr;
9(1):169.
PMID: 35418585
The genomes of thousands of individuals are profiled within Dutch healthcare and research each year. However, this valuable genomic data, associated clinical data and consent are captured in different ways...