Sanchita Mukherjee
Overview
Explore the profile of Sanchita Mukherjee including associated specialties, affiliations and a list of published articles.
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Articles
23
Citations
378
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0
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Recent Articles
11.
Mondal M, Mukherjee S, Bhattacharyya D
J Mol Model
. 2014 Oct;
20(11):2499.
PMID: 25352516
Deformation of DNA takes place quite often due to binding of small molecules or proteins with DNA. Such deformation is significant due to minor groove binding and, besides electrostatic interactions,...
12.
Stacking interactions in RNA and DNA: Roll-slide energy hyperspace for ten unique dinucleotide steps
Mukherjee S, Kailasam S, Bansal M, Bhattacharyya D
Biopolymers
. 2014 Sep;
103(3):134-47.
PMID: 25257334
Understanding dinucleotide sequence directed structures of nuleic acids and their variability from experimental observation remained ineffective due to unavailability of statistically meaningful data. We have attempted to understand this from...
13.
Mukherjee S, Kundu S, Bhattacharyya D
J Comput Aided Mol Des
. 2014 May;
28(7):735-49.
PMID: 24865848
Understanding unwinding and melting of double helical DNA is very important to characterize role of DNA in replication, transcription, translation etc. Sequence dependent melting thermodynamics is used extensively for detecting...
14.
Mukherjee S, Kailasam S, Bansal M, Bhattacharyya D
Biopolymers
. 2013 Jun;
101(1):107-20.
PMID: 23722519
Double helical structures of DNA and RNA are mostly determined by base pair stacking interactions, which give them the base sequence-directed features, such as small roll values for the purine-pyrimidine...
15.
BasuRay S, Mukherjee S, Romero E, Seaman M, Wandinger-Ness A
J Biol Chem
. 2012 Nov;
288(2):1135-49.
PMID: 23188822
Rab7 belongs to the Ras superfamily of small GTPases and is a master regulator of early to late endocytic membrane transport. Four missense mutations in the late endosomal Rab7 GTPase...
16.
Mukherjee S, Bhattacharyya D
J Biomol Struct Dyn
. 2012 Sep;
31(8):896-912.
PMID: 22963740
A large amount of experimental evidence is available on the effect of magnesium ions on the structure and stability of DNA double helix. Less is known, however, on how these...
17.
Kundu S, Mukherjee S, Bhattacharyya D
J Biosci
. 2012 Jul;
37(3):445-55.
PMID: 22750982
The three-dimensional structure of DNA contains various sequence-dependent structural information, which control many cellular processes in life, such as replication, transcription, DNA repair, etc. For the above functions, DNA double...
18.
BasuRay S, Mukherjee S, Romero E, Wilson M, Wandinger-Ness A
PLoS One
. 2010 Dec;
5(12):e15351.
PMID: 21151572
Missense mutants in the late endosomal Rab7 GTPase cause the autosomal dominant peripheral neuropathy Charcot-Marie-Tooth disease type 2B (CMT2B). As yet, the pathological mechanisms connecting mutant Rab7 protein expression to...
19.
Mukherjee S, Kallay L, Brett C, Rao R
Biochem J
. 2006 May;
398(1):97-105.
PMID: 16671892
Yeast Nhx1 [Na+(K+)/H+ exchanger 1] is an intracellular Na+(K+)/H+ exchanger, localizing to the late endosome where it is important for ion homoeostasis and vesicle trafficking. Phylogenetic analysis of NHE (Na+/H+...
20.
Mukherjee S, Tessema M, Wandinger-Ness A
Circ Res
. 2006 Apr;
98(6):743-56.
PMID: 16574915
Receptor tyrosine kinases (RTKs) play a pivotal role in the development and function of the cardiovascular system. Ligand-activated RTKs promote numerous downstream signal transduction pathways that lead to vascular permeability,...