Robert W Cottingham
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Explore the profile of Robert W Cottingham including associated specialties, affiliations and a list of published articles.
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14
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968
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Recent Articles
1.
Imai S, Allen B, Hochanadel L, Alexander W, Cottingham R, Schadt C, et al.
Microbiol Resour Announc
. 2024 Sep;
13(11):e0080124.
PMID: 39347696
sp. strain Populi is a bacterium from the phylum Verrucomicrobiota, isolated from the rhizosphere of a black cottonwood tree, , from the Cascade mountains in Washington. Its 6.6-Mb chromosome was...
2.
Yang X, Medford J, Markel K, Shih P, De Paoli H, Trinh C, et al.
Biodes Res
. 2023 Oct;
2020:8051764.
PMID: 37849899
Human life intimately depends on plants for food, biomaterials, health, energy, and a sustainable environment. Various plants have been genetically improved mostly through breeding, along with limited modification via genetic...
3.
Chivian D, Jungbluth S, Dehal P, Wood-Charlson E, Canon R, Allen B, et al.
Nat Protoc
. 2022 Nov;
18(2):658.
PMID: 36451056
No abstract available.
4.
Chivian D, Jungbluth S, Dehal P, Wood-Charlson E, Canon R, Allen B, et al.
Nat Protoc
. 2022 Nov;
18(1):208-238.
PMID: 36376589
Uncultivated Bacteria and Archaea account for the vast majority of species on Earth, but obtaining their genomes directly from the environment, using shotgun sequencing, has only become possible recently. To...
5.
Seaver S, Liu F, Zhang Q, Jeffryes J, Faria J, Edirisinghe J, et al.
Nucleic Acids Res
. 2020 Nov;
49(D1):D1555.
PMID: 33179751
No abstract available.
6.
Seaver S, Liu F, Zhang Q, Jeffryes J, Faria J, Edirisinghe J, et al.
Nucleic Acids Res
. 2020 Sep;
49(D1):D575-D588.
PMID: 32986834
For over 10 years, ModelSEED has been a primary resource for the construction of draft genome-scale metabolic models based on annotated microbial or plant genomes. Now being released, the biochemistry...
7.
Arkin A, Cottingham R, Henry C, Harris N, Stevens R, Maslov S, et al.
Nat Biotechnol
. 2018 Jul;
36(7):566-569.
PMID: 29979655
No abstract available.
8.
Lee L, Izquierdo J, Blumer-Schuette S, Zurawski J, Conway J, Cottingham R, et al.
Genome Announc
. 2015 May;
3(3).
PMID: 25977428
The genus Caldicellulosiruptor contains extremely thermophilic, cellulolytic bacteria capable of lignocellulose deconstruction. Currently, complete genome sequences for eleven Caldicellulosiruptor species are available. Here, we report genome sequences for three additional...
9.
Elkins J, Hamilton-Brehm S, Lucas S, Han J, Lapidus A, Cheng J, et al.
Genome Announc
. 2013 Apr;
1(2):e0016213.
PMID: 23580711
Thermodesulfobacterium geofontis OPF15(T) (ATCC BAA-2454, JCM 18567) was isolated from Obsidian Pool, Yellowstone National Park, and grows optimally at 83°C. The 1.6-Mb genome sequence was finished at the Joint Genome...
10.
Mavromatis K, Land M, Brettin T, Quest D, Copeland A, Clum A, et al.
PLoS One
. 2012 Dec;
7(12):e48837.
PMID: 23251337
Background: The emergence of next generation sequencing (NGS) has provided the means for rapid and high throughput sequencing and data generation at low cost, while concomitantly creating a new set...