Ritvik Vasan
Overview
Explore the profile of Ritvik Vasan including associated specialties, affiliations and a list of published articles.
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Articles
8
Citations
141
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0
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Recent Articles
1.
Interpretable representation learning for 3D multi-piece intracellular structures using point clouds
Vasan R, Ferrante A, Borensztejn A, Frick C, Gaudreault N, Mogre S, et al.
bioRxiv
. 2024 Aug;
PMID: 39091871
A key challenge in understanding subcellular organization is quantifying interpretable measurements of intracellular structures with complex multi-piece morphologies in an objective, robust and generalizable manner. Here we introduce a morphology-appropriate...
2.
Dixon J, Frick C, Leveille C, Garrison P, Lee P, Mogre S, et al.
bioRxiv
. 2024 Jul;
PMID: 38979140
To investigate the fundamental question of how cellular variations arise across spatiotemporal scales in a population of identical healthy cells, we focused on nuclear growth in hiPS cell colonies as...
3.
Viana M, Chen J, Knijnenburg T, Vasan R, Yan C, Arakaki J, et al.
Nature
. 2023 Jan;
613(7943):345-354.
PMID: 36599983
Understanding how a subset of expressed genes dictates cellular phenotype is a considerable challenge owing to the large numbers of molecules involved, their combinatorics and the plethora of cellular behaviours...
4.
Vasan R, Rowan M, Lee C, Johnson G, Rangamani P, Holst M
Front Phys
. 2022 Oct;
7.
PMID: 36188416
In this perspective, we examine three key aspects of an end-to-end pipeline for realistic cellular simulations: reconstruction and segmentation of cellular structures; generation of cellular structures; and mesh generation, simulation,...
5.
Serwas D, Akamatsu M, Moayed A, Vegesna K, Vasan R, Hill J, et al.
Dev Cell
. 2022 May;
57(9):1132-1145.e5.
PMID: 35504288
Actin assembly provides force for a multitude of cellular processes. Compared to actin-assembly-based force production during cell migration, relatively little is understood about how actin assembly generates pulling forces for...
6.
Auddya D, Zhang X, Gulati R, Vasan R, Garikipati K, Rangamani P, et al.
Proc Math Phys Eng Sci
. 2022 Feb;
477(2255):20210246.
PMID: 35153593
Biomembranes play a central role in various phenomena like locomotion of cells, cell-cell interactions, packaging and transport of nutrients, transmission of nerve impulses, and in maintaining organelle morphology and functionality....
7.
Akamatsu M, Vasan R, Serwas D, Ferrin M, Rangamani P, Drubin D
Elife
. 2020 Jan;
9.
PMID: 31951196
Force generation by actin assembly shapes cellular membranes. An experimentally constrained multiscale model shows that a minimal branched actin network is sufficient to internalize endocytic pits against membrane tension. Around...
8.
Vasan R, Maleckar M, Williams C, Rangamani P
Biophys J
. 2019 Oct;
117(9):1714-1727.
PMID: 31648791
Cell shapes and connectivities evolve over time as the colony changes shape or embryos develop. Shapes of intercellular interfaces are closely coupled with the forces resulting from actomyosin interactions, membrane...