Richard H Adams
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Explore the profile of Richard H Adams including associated specialties, affiliations and a list of published articles.
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30
Citations
439
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Recent Articles
1.
Bernstein J, Francioli Y, Schield D, Adams R, Perry B, Farleigh K, et al.
Mol Phylogenet Evol
. 2025 Feb;
206:108309.
PMID: 39938672
Species tree inference is often assumed to be more accurate as datasets increase in size, with whole genomes representing the best-case-scenario for estimating a single, most-likely speciation history with high...
2.
Gopalan S, Perry B, Francioli Y, Schield D, Guss H, Bernstein J, et al.
Genome Biol Evol
. 2024 May;
16(7).
PMID: 38753011
Understanding and predicting the relationships between genotype and phenotype is often challenging, largely due to the complex nature of eukaryotic gene regulation. A step towards this goal is to map...
3.
Nikolakis Z, Adams R, Wade K, Lund A, Carlton E, Castoe T, et al.
Front Epidemiol
. 2024 Mar;
2:932021.
PMID: 38455290
Schistosomiasis is a neglected tropical disease caused by multiple parasitic species, and which impacts over 200 million people globally, mainly in low- and middle-income countries. Genomic surveillance to detect evidence...
4.
Westfall A, Gopalan S, Perry B, Adams R, Saviola A, Mackessy S, et al.
Genome Biol Evol
. 2023 Jun;
15(6).
PMID: 37311204
The ubiquitous cellular heterogeneity underlying many organism-level phenotypes raises questions about what factors drive this heterogeneity and how these complex heterogeneous systems evolve. Here, we use single-cell expression data from...
5.
Nikolakis Z, Schield D, Westfall A, Perry B, Ivey K, Orton R, et al.
Evolution
. 2022 Sep;
76(11):2513-2530.
PMID: 36111705
Hybrid zones provide valuable opportunities to understand the genomic mechanisms that promote speciation by providing insight into factors involved in intermediate stages of speciation. Here, we investigate introgression in a...
6.
Schield D, Perry B, Adams R, Holding M, Nikolakis Z, Gopalan S, et al.
Nat Ecol Evol
. 2022 Jul;
6(9):1367-1380.
PMID: 35851850
The origin of snake venom involved duplication and recruitment of non-venom genes into venom systems. Several studies have predicted that directional positive selection has governed this process. Venom composition varies...
7.
Baird H, Shin S, Oberprieler R, Hulle M, Vernon P, Moon K, et al.
Proc Natl Acad Sci U S A
. 2021 Jun;
118(24).
PMID: 34108239
Global cooling and glacial-interglacial cycles since Antarctica's isolation have been responsible for the diversification of the region's marine fauna. By contrast, these same Earth system processes are thought to have...
8.
Adams R, Blackmon H, DeGiorgio M
Syst Biol
. 2021 Feb;
70(4):660-680.
PMID: 33587145
Stochastic models of character trait evolution have become a cornerstone of evolutionary biology in an array of contexts. While probabilistic models have been used extensively for statistical inference, they have...
9.
Adams R, Castoe T, DeGiorgio M
Bioinformatics
. 2020 Oct;
37(13):1923-1925.
PMID: 33051672
Summary: Here, we present PhyloWGA, an open source R package for conducting phylogenetic analysis and investigation of whole genome data. Availabilityand Implementation: Available at Github (https://github.com/radamsRHA/PhyloWGA). Supplementary Information: Supplementary data...
10.
Perry B, Schield D, Adams R, Castoe T
Mol Biol Evol
. 2020 Sep;
38(3):904-910.
PMID: 32986808
Microchromosomes are common yet poorly understood components of many vertebrate genomes. Recent studies have revealed that microchromosomes contain a high density of genes and possess other distinct characteristics compared with...