R Apweiler
Overview
Explore the profile of R Apweiler including associated specialties, affiliations and a list of published articles.
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48
Citations
11751
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Recent Articles
1.
Blake J, Dolan M, Drabkin H, Hill D, Li N, Sitnikov D, et al.
Nucleic Acids Res
. 2012 Nov;
41(Database issue):D530-5.
PMID: 23161678
The Gene Ontology (GO) Consortium (GOC, http://www.geneontology.org) is a community-based bioinformatics resource that classifies gene product function through the use of structured, controlled vocabularies. Over the past year, the GOC...
2.
Kerrien S, Alam-Faruque Y, Aranda B, Bancarz I, Bridge A, Derow C, et al.
Nucleic Acids Res
. 2006 Dec;
35(Database issue):D561-5.
PMID: 17145710
IntAct is an open source database and software suite for modeling, storing and analyzing molecular interaction data. The data available in the database originates entirely from published literature and is...
3.
Carninci P, Kasukawa T, Katayama S, Gough J, Frith M, Maeda N, et al.
Science
. 2005 Sep;
309(5740):1559-63.
PMID: 16141072
This study describes comprehensive polling of transcription start and termination sites and analysis of previously unidentified full-length complementary DNAs derived from the mouse genome. We identify the 5' and 3'...
4.
Quevillon E, Silventoinen V, Pillai S, Harte N, Mulder N, Apweiler R, et al.
Nucleic Acids Res
. 2005 Jun;
33(Web Server issue):W116-20.
PMID: 15980438
InterProScan [E. M. Zdobnov and R. Apweiler (2001) Bioinformatics, 17, 847-848] is a tool that combines different protein signature recognition methods from the InterPro [N. J. Mulder, R. Apweiler, T....
5.
Velankar S, McNeil P, Mittard-Runte V, Suarez A, Barrell D, Apweiler R, et al.
Nucleic Acids Res
. 2004 Dec;
33(Database issue):D262-5.
PMID: 15608192
The Macromolecular Structure Database (MSD) group (http://www.ebi.ac.uk/msd/) continues to enhance the quality and consistency of macromolecular structure data in the worldwide Protein Data Bank (wwPDB) and to work towards the...
6.
Wieser D, Kretschmann E, Apweiler R
Bioinformatics
. 2004 Jul;
20 Suppl 1:i342-7.
PMID: 15262818
Motivation: Automatically generated annotation on protein data of UniProt (Universal Protein Resource) is planned to be publicly available on the UniProt web pages in April 2004. It is expected that...
7.
Martin-Sanchez F, Iakovidis I, Norager S, Maojo V, de Groen P, van der Lei J, et al.
J Biomed Inform
. 2004 Mar;
37(1):30-42.
PMID: 15016384
In this paper, we review the results of BIOINFOMED, a study funded by the European Commission (EC) with the purpose to analyse the different issues and challenges in the area...
8.
Harris M, Clark J, Ireland A, Lomax J, Ashburner M, Foulger R, et al.
Nucleic Acids Res
. 2003 Dec;
32(Database issue):D258-61.
PMID: 14681407
The Gene Ontology (GO) project (http://www. geneontology.org/) provides structured, controlled vocabularies and classifications that cover several domains of molecular and cellular biology and are freely available for community use in...
9.
Kersey P, Morris L, Hermjakob H, Apweiler R
Methods Inf Med
. 2003 May;
42(2):154-60.
PMID: 12743652
Objectives: The increasing production of molecular biology data in the post-genomic era, and the proliferation of databases that store it, require the development of an integrative layer in database services...
10.
Kriventseva E, Servant F, Apweiler R
Nucleic Acids Res
. 2003 Jan;
31(1):388-9.
PMID: 12520029
The CluSTr database (http://www.ebi.ac.uk/clustr/) offers an automatic classification of SWISS-PROT+TrEMBL proteins into groups of related proteins. The clustering is based on analysis of all pair-wise sequence comparisons between proteins using...