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Nikhil Naik

Explore the profile of Nikhil Naik including associated specialties, affiliations and a list of published articles. Areas
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Articles 9
Citations 584
Followers 0
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Recent Articles
1.
Nijkamp E, Ruffolo J, Weinstein E, Naik N, Madani A
Cell Syst . 2023 Nov; 14(11):968-978.e3. PMID: 37909046
Attention-based models trained on protein sequences have demonstrated incredible success at classification and generation tasks relevant for artificial-intelligence-driven protein design. However, we lack a sufficient understanding of how very large-scale...
2.
Esteva A, Feng J, van der Wal D, Huang S, Simko J, DeVries S, et al.
NPJ Digit Med . 2023 Feb; 6(1):27. PMID: 36813827
No abstract available.
3.
Madani A, Krause B, Greene E, Subramanian S, Mohr B, Holton J, et al.
Nat Biotechnol . 2023 Jan; 41(8):1099-1106. PMID: 36702895
Deep-learning language models have shown promise in various biotechnological applications, including protein design and engineering. Here we describe ProGen, a language model that can generate protein sequences with a predictable...
4.
Esteva A, Feng J, van der Wal D, Huang S, Simko J, DeVries S, et al.
NPJ Digit Med . 2022 Jun; 5(1):71. PMID: 35676445
Prostate cancer is the most frequent cancer in men and a leading cause of cancer death. Determining a patient's optimal therapy is a challenge, where oncologists must select a therapy...
5.
Esteva A, Chou K, Yeung S, Naik N, Madani A, Mottaghi A, et al.
NPJ Digit Med . 2021 Jan; 4(1):5. PMID: 33420381
A decade of unprecedented progress in artificial intelligence (AI) has demonstrated the potential for many fields-including medicine-to benefit from the insights that AI techniques can extract from data. Here we...
6.
Naik N, Madani A, Esteva A, Keskar N, Press M, Ruderman D, et al.
Nat Commun . 2020 Nov; 11(1):5727. PMID: 33199723
For newly diagnosed breast cancer, estrogen receptor status (ERS) is a key molecular marker used for prognosis and treatment decisions. During clinical management, ERS is determined by pathologists from immunohistochemistry...
7.
Naik N, Kominers S, Raskar R, Glaeser E, Hidalgo C
Proc Natl Acad Sci U S A . 2017 Jul; 114(29):7571-7576. PMID: 28684401
Which neighborhoods experience physical improvements? In this paper, we introduce a computer vision method to measure changes in the physical appearances of neighborhoods from time-series street-level imagery. We connect changes...
8.
Raviv D, Barsi C, Naik N, Feigin M, Raskar R
Opt Express . 2014 Oct; 22(17):20164-76. PMID: 25321226
We present a novel approach for evaluation of position and orientation of geometric shapes from scattered time-resolved data. Traditionally, imaging systems treat scattering as unwanted and are designed to mitigate...
9.
Naik N, Barsi C, Velten A, Raskar R
J Opt Soc Am A Opt Image Sci Vis . 2014 Jul; 31(5):957-63. PMID: 24979627
Imaging through complex media is a well-known challenge, as scattering distorts a signal and invalidates imaging equations. For coherent imaging, the input field can be reconstructed using phase conjugation or...