Nessim Raouraoua
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Explore the profile of Nessim Raouraoua including associated specialties, affiliations and a list of published articles.
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3
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23
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Recent Articles
1.
Saravanan V, Raouraoua N, Brysbaert G, Giordano S, Lensink M, Cleri F, et al.
Sci Rep
. 2025 Mar;
15(1):7993.
PMID: 40055399
Uracil-DNA glycosylase (UDG) is the first enzyme in the base-excision repair (BER) pathway, acting on uracil bases in DNA. How UDG finds its targets has not been conclusively resolved yet....
2.
Raouraoua N, Lensink M, Brysbaert G
Proteins
. 2025 Jan;
PMID: 39868877
Massive sampling with AlphaFold2 improves protein-protein complex predictions. This has been shown during the last CASP15-CAPRI blind prediction round by the AFsample tool. However, more difficult targets including antibody-antigen binding...
3.
Semwal S, Karamolegkou M, Flament S, Raouraoua N, Verstraete K, Thureau A, et al.
Acta Crystallogr F Struct Biol Commun
. 2024 Dec;
81(Pt 1):19-29.
PMID: 39718025
Monoclonal antibodies recognizing nonprotein antigens remain largely underrepresented in our understanding of the molecular repertoire of innate and adaptive immunity. One such antibody is Mannitou, a murine IgM that recognizes...
4.
MassiveFold: unveiling AlphaFold's hidden potential with optimized and parallelized massive sampling
Raouraoua N, Mirabello C, Very T, Blanchet C, Wallner B, Lensink M, et al.
Nat Comput Sci
. 2024 Nov;
4(11):824-828.
PMID: 39528570
Massive sampling in AlphaFold enables access to increased structural diversity. In combination with its efficient confidence ranking, this unlocks elevated modeling capabilities for monomeric structures and foremost for protein assemblies....
5.
Lensink M, Brysbaert G, Raouraoua N, Bates P, Giulini M, Honorato R, et al.
Proteins
. 2023 Oct;
91(12):1658-1683.
PMID: 37905971
We present the results for CAPRI Round 54, the 5th joint CASP-CAPRI protein assembly prediction challenge. The Round offered 37 targets, including 14 homodimers, 3 homo-trimers, 13 heterodimers including 3...