Nathan C VerBerkmoes
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Explore the profile of Nathan C VerBerkmoes including associated specialties, affiliations and a list of published articles.
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78
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3905
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Recent Articles
1.
Maier T, Lucio M, Ho Lee L, VerBerkmoes N, Brislawn C, Bernhardt J, et al.
mBio
. 2017 Oct;
8(5).
PMID: 29042495
Diet can influence the composition of the human microbiome, and yet relatively few dietary ingredients have been systematically investigated with respect to their impact on the functional potential of the...
2.
Duhaime M, Solonenko N, Roux S, VerBerkmoes N, Wichels A, Sullivan M
Front Microbiol
. 2017 Jul;
8:1241.
PMID: 28729861
Viruses influence the ecology and evolutionary trajectory of microbial communities. Yet our understanding of their roles in ecosystems is limited by the paucity of model systems available for hypothesis generation...
3.
Brum J, Ignacio-Espinoza J, Kim E, Trubl G, Jones R, Roux S, et al.
Proc Natl Acad Sci U S A
. 2016 Feb;
113(9):2436-41.
PMID: 26884177
Viruses are ecologically important, yet environmental virology is limited by dominance of unannotated genomic sequences representing taxonomic and functional "viral dark matter." Although recent analytical advances are rapidly improving taxonomic...
4.
Tissue-specific transcriptomics and proteomics of a filarial nematode and its Wolbachia endosymbiont
Luck A, Anderson K, McClung C, VerBerkmoes N, Foster J, Michalski M, et al.
BMC Genomics
. 2015 Nov;
16:920.
PMID: 26559510
Background: Filarial nematodes cause debilitating human diseases. While treatable, recent evidence suggests drug resistance is developing, necessitating the development of novel targets and new treatment options. Although transcriptomic and proteomic...
5.
Majumdar S, Almeida I, Arigi E, Choi H, VerBerkmoes N, Trujillo-Reyes J, et al.
Environ Sci Technol
. 2015 Oct;
49(22):13283-93.
PMID: 26488752
The rapidly growing literature on the response of edible plants to nanoceria has provided evidence of its uptake and bioaccumulation, which delineates a possible route of entry into the food...
6.
Hultman J, Waldrop M, Mackelprang R, David M, McFarland J, Blazewicz S, et al.
Nature
. 2015 Mar;
521(7551):208-12.
PMID: 25739499
Over 20% of Earth's terrestrial surface is underlain by permafrost with vast stores of carbon that, once thawed, may represent the largest future transfer of carbon from the biosphere to...
7.
Lara E, Holmfeldt K, Solonenko N, Sa E, Ignacio-Espinoza J, Cornejo-Castillo F, et al.
PLoS One
. 2015 Jan;
10(1):e0114829.
PMID: 25587991
Marine viruses (phages) alter bacterial diversity and evolution with impacts on marine biogeochemical cycles, and yet few well-developed model systems limit opportunities for hypothesis testing. Here we isolate phage B8b...
8.
Cortes L, Vainauskas S, Dai N, McClung C, Shah M, Benner J, et al.
Proteomics
. 2014 Sep;
14(21-22):2471-84.
PMID: 25262930
Glycosylphosphatidylinositol-anchored proteins (GPI-APs) are an important class of glycoproteins that are tethered to the surface of mammalian cells via the lipid GPI. GPI-APs have been implicated in many important cellular...
9.
Schleicher T, VerBerkmoes N, Shah M, Nyholm S
Mol Cell Proteomics
. 2014 Jul;
13(10):2673-86.
PMID: 25038065
The squid Euprymna scolopes and the luminescent bacterium Vibrio fischeri form a highly specific beneficial light organ symbiosis. Not only does the host have to select V. fischeri from the...
10.
Mondav R, Woodcroft B, Kim E, McCalley C, Hodgkins S, Crill P, et al.
Nat Commun
. 2014 Feb;
5:3212.
PMID: 24526077
Thawing permafrost promotes microbial degradation of cryo-sequestered and new carbon leading to the biogenic production of methane, creating a positive feedback to climate change. Here we determine microbial community composition...