Michaela M Salcher
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Explore the profile of Michaela M Salcher including associated specialties, affiliations and a list of published articles.
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Recent Articles
21.
Simek K, Grujcic V, Mukherjee I, Kasalicky V, Nedoma J, Posch T, et al.
FEMS Microbiol Ecol
. 2020 Jun;
96(10).
PMID: 32556274
Heterotrophic nanoflagellates (HNF) are considered as major planktonic bacterivores, however, larger HNF taxa can also be important predators of eukaryotes. To examine this trophic cascading, natural protistan communities from a...
22.
Kavagutti V, Andrei A, Mehrshad M, Salcher M, Ghai R
Microbiome
. 2020 Mar;
8(1):40.
PMID: 32192536
Following publication of the original article [1], the authors reported that an affiliation of the first author was missing.
23.
Piwosz K, Shabarova T, Pernthaler J, Posch T, Simek K, Porcal P, et al.
mSphere
. 2020 Mar;
5(2).
PMID: 32132159
High-throughput sequencing (HTS) of gene amplicons is a preferred method of assessing microbial community composition, because it rapidly provides information from a large number of samples at high taxonomic resolution...
24.
Phage-centric ecological interactions in aquatic ecosystems revealed through ultra-deep metagenomics
Kavagutti V, Andrei A, Mehrshad M, Salcher M, Ghai R
Microbiome
. 2019 Oct;
7(1):135.
PMID: 31630686
The persistent inertia in the ability to culture environmentally abundant microbes from aquatic ecosystems represents an obstacle in disentangling the complex web of ecological interactions spun by a diverse assortment...
25.
Salcher M, Schaefle D, Kaspar M, Neuenschwander S, Ghai R
ISME J
. 2019 Jul;
13(11):2764-2777.
PMID: 31292537
The most abundant aquatic microbes are small in cell and genome size. Genome-streamlining theory predicts gene loss caused by evolutionary selection driven by environmental factors, favouring superior competitors for limiting...
26.
Bulzu P, Andrei A, Salcher M, Mehrshad M, Inoue K, Kandori H, et al.
Nat Microbiol
. 2019 Apr;
4(7):1129-1137.
PMID: 30936485
Recent advances in phylogenomic analyses and increased genomic sampling of uncultured prokaryotic lineages have brought compelling evidence in support of the emergence of eukaryotes from within the archaeal domain of...
27.
Callieri C, Slabakova V, Dzhembekova N, Slabakova N, Peneva E, Cabello-Yeves P, et al.
ISME J
. 2019 Mar;
13(7):1676-1687.
PMID: 30820035
The Black Sea is the largest meromictic sea with a reservoir of anoxic water extending from 100 to 1000 m depth. These deeper layers are characterised by a poorly understood...
28.
Andrei A, Salcher M, Mehrshad M, Rychtecky P, Znachor P, Ghai R
ISME J
. 2019 Jan;
13(4):1056-1071.
PMID: 30610231
Freshwater environments teem with microbes that do not have counterparts in culture collections or genetic data available in genomic repositories. Currently, our apprehension of evolutionary ecology of freshwater bacteria is...
29.
Okazaki Y, Salcher M, Callieri C, Nakano S
Front Microbiol
. 2018 Dec;
9:2891.
PMID: 30542336
CL500-11 (phylum ) is one of the most ubiquitous and abundant bacterioplankton lineages in deep freshwater lakes inhabiting the oxygenated hypolimnion. While metagenomics predicted possible eco-physiological characteristics of this uncultured...
30.
Mehrshad M, Salcher M, Okazaki Y, Nakano S, Simek K, Andrei A, et al.
Microbiome
. 2018 Oct;
6(1):176.
PMID: 30285851
Background: Representatives of the phylum Chloroflexi, though reportedly highly abundant in the extensive deep water habitats of both marine (SAR202 up to 30% of total prokaryotes) and freshwater (CL500-11 up...