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Rohit Ghai

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Articles 91
Citations 2866
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Recent Articles
1.
Wong H, Bulzu P, Ghai R, Chiriac M, Salcher M
ISME Commun . 2024 Nov; 4(1):ycae124. PMID: 39544963
are abundant in soil, peatlands, and sediments, but their ecology in freshwater environments remains understudied. UBA12189, an genus, is an uncultivated, genome-streamlined lineage with a small genome size found in...
2.
Boukheloua R, Mukherjee I, Park H, Simek K, Kasalicky V, Ngochera M, et al.
ISME J . 2024 Sep; 18(1). PMID: 39303138
Telonemia are one of the oldest identified marine protists that for most part of their history have been recognized as a distinct incertae sedis lineage. Today, their evolutionary proximity to...
3.
Park H, Bulzu P, Shabarova T, Kavagutti V, Ghai R, Kasalicky V, et al.
Microbiome . 2024 Aug; 12(1):150. PMID: 39127705
Background: Picocyanobacteria from the genera Prochlorococcus, Synechococcus, and Cyanobium are the most widespread photosynthetic organisms in aquatic ecosystems. However, their freshwater populations remain poorly explored, due to uneven and insufficient...
4.
Villena-Alemany C, Mujakic I, Fecskeova L, Woodhouse J, Auladell A, Dean J, et al.
Microbiome . 2024 Mar; 12(1):65. PMID: 38539229
Background: Aerobic anoxygenic phototrophic (AAP) bacteria are heterotrophic bacteria that supply their metabolism with light energy harvested by bacteriochlorophyll-a-containing reaction centers. Despite their substantial contribution to bacterial biomass, microbial food...
5.
Vieira H, Bulzu P, Kasalicky V, Haber M, Znachor P, Piwosz K, et al.
ISME J . 2024 Feb; 18(1). PMID: 38401169
Photosynthetic cryptophytes are ubiquitous protists that are major participants in the freshwater phytoplankton bloom at the onset of spring. Mortality due to change in environmental conditions and grazing have been...
6.
Layoun P, Lopez-Perez M, Haro-Moreno J, Haber M, Thrash J, Henson M, et al.
ISME J . 2024 Feb; 18(1). PMID: 38365254
The evolutionary trajectory of Methylophilaceae includes habitat transitions from freshwater sediments to freshwater and marine pelagial that resulted in genome reduction (genome-streamlining) of the pelagic taxa. However, the extent of...
7.
Kavagutti V, Chiriac M, Ghai R, Salcher M, Haber M
ISME J . 2023 Mar; 17(6):943-946. PMID: 36964199
Low-GC Actinobacteriota of the order 'Ca. Nanopelagicales' (also known as acI or hgcI clade) are abundant in freshwaters around the globe. Extensive predation pressure by phages has been assumed to...
8.
Ngugi D, Salcher M, Andrei A, Ghai R, Klotz F, Chiriac M, et al.
Sci Adv . 2023 Feb; 9(5):eadc9392. PMID: 36724220
Ammonia-oxidizing archaea (AOA) play a key role in the aquatic nitrogen cycle. Their genetic diversity is viewed as the outcome of evolutionary processes that shaped ancestral transition from terrestrial to...
9.
Kavagutti V, Bulzu P, Chiriac C, Salcher M, Mukherjee I, Shabarova T, et al.
Microbiome . 2023 Jan; 11(1):15. PMID: 36698172
Background: The phytoplankton spring bloom in freshwater habitats is a complex, recurring, and dynamic ecological spectacle that unfolds at multiple biological scales. Although enormous taxonomic shifts in microbial assemblages during...
10.
Simek K, Mukherjee I, Szoke-Nagy T, Haber M, Salcher M, Ghai R
ISME J . 2022 Oct; 17(1):84-94. PMID: 36207492
Morphology-based microscopic approaches are insufficient for a taxonomic classification of bacterivorous heterotrophic nanoflagellates (HNF) in aquatic environments since their cells do not display reliably distinguishable morphological features. This leads to...