Matthew J Rodesch
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Explore the profile of Matthew J Rodesch including associated specialties, affiliations and a list of published articles.
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11
Citations
1008
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Recent Articles
1.
Chaumeil J, Micsinai M, Ntziachristos P, Deriano L, Wang J, Ji Y, et al.
Cell Rep
. 2013 Feb;
3(2):359-70.
PMID: 23416051
V(D)J recombination is essential for generating a diverse array of B and T cell receptors that can recognize and combat foreign antigens. As with any recombination event, tight control is...
2.
Boyle S, Rodesch M, Halvensleben H, Jeddeloh J, Bickmore W
Chromosome Res
. 2011 Oct;
19(7):901-9.
PMID: 22006037
The ability to visualize specific DNA sequences, on chromosomes and in nuclei, by fluorescence in situ hybridization (FISH) is fundamental to many aspects of genetics, genomics and cell biology. Probe...
3.
Bainbridge M, Wang M, Burgess D, Kovar C, Rodesch M, DAscenzo M, et al.
Genome Biol
. 2010 Jun;
11(6):R62.
PMID: 20565776
We have developed a solution-based method for targeted DNA capture-sequencing that is directed to the complete human exome. Using this approach allows the discovery of greater than 95% of all...
4.
Heap G, Yang J, Downes K, Healy B, Hunt K, Bockett N, et al.
Hum Mol Genet
. 2009 Oct;
19(1):122-34.
PMID: 19825846
Many disease-associated variants identified by genome-wide association (GWA) studies are expected to regulate gene expression. Allele-specific expression (ASE) quantifies transcription from both haplotypes using individuals heterozygous at tested SNPs. We...
5.
Parikh H, Deng Z, Yeager M, Boland J, Matthews C, Jia J, et al.
Hum Genet
. 2009 Oct;
127(1):91-9.
PMID: 19823874
Single nucleotide polymorphisms (SNPs) in the KLK3 gene on chromosome 19q13.33 are associated with serum prostate-specific antigen (PSA) levels. Recent genome wide association studies of prostate cancer have yielded conflicting...
6.
Chan C, Wohlbach D, Rodesch M, Sussman M
FEBS Lett
. 2008 Mar;
582(6):967-76.
PMID: 18307990
Transcriptional responses to growth in high environmental calcium concentrations were characterized and compared between wild-type and mutant Arabidopsis plants containing a knockout mutation in the gene encoding a cyclic nucleotide-gated...
7.
Phillips M, Lockett M, Rodesch M, Shortreed M, Cerrina F, Smith L
Nucleic Acids Res
. 2007 Dec;
36(1):e7.
PMID: 18084027
Glass has become the standard substrate for the preparation of DNA arrays. Typically, glass is modified using silane chemistries to provide an appropriate functional group for nucleic acid synthesis or...
8.
Hodges E, Xuan Z, Balija V, Kramer M, Molla M, Smith S, et al.
Nat Genet
. 2007 Nov;
39(12):1522-7.
PMID: 17982454
Increasingly powerful sequencing technologies are ushering in an era of personal genome sequences and raising the possibility of using such information to guide medical decisions. Genome resequencing also promises to...
9.
Albert T, Molla M, Muzny D, Nazareth L, Wheeler D, Song X, et al.
Nat Methods
. 2007 Oct;
4(11):903-5.
PMID: 17934467
We applied high-density microarrays to the enrichment of specific sequences from the human genome for high-throughput sequencing. After capture of 6,726 approximately 500-base 'exon' segments, and of 'locus-specific' regions ranging...
10.
Nelson D, Wohlbach D, Rodesch M, Stolc V, Sussman M, Samanta M
FEBS Lett
. 2007 Jul;
581(18):3363-70.
PMID: 17604026
This study identified the widely used T7 in vitro transcription system as a major source of artifact in the tiling array data from nine eukaryotic genomes. The most affected probes...