Mathieu Lavallee-Adam
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Explore the profile of Mathieu Lavallee-Adam including associated specialties, affiliations and a list of published articles.
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49
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1158
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Recent Articles
1.
Lavallee-Adam M, Pelletier A, Diedrich J, Pinto A, Martinez-Bartolome S, Petrascheck M, et al.
J Am Soc Mass Spectrom
. 2025 Mar;
PMID: 40067882
To understand the mechanism of action of a drug and assess its clinical usefulness and viability, it is imperative that its affinity for its putative targets is determined. When coupled...
2.
Hashimoto-Roth E, Forget D, Gaspar V, Gaspar V, Bennett S, Gauthier M, et al.
J Proteome Res
. 2025 Jan;
24(2):383-396.
PMID: 39772751
Immunoprecipitation coupled to tandem mass spectrometry (IP-MS/MS) methods are often used to identify protein-protein interactions (PPIs). While these approaches are prone to false positive identifications through contamination and antibody nonspecific...
3.
Kovalchik K, Hamelin D, Kubiniok P, Bourdin B, Mostefai F, Poujol R, et al.
Nat Commun
. 2024 Nov;
15(1):10316.
PMID: 39609459
Next-generation T-cell-directed vaccines for COVID-19 focus on establishing lasting T-cell immunity against current and emerging SARS-CoV-2 variants. Precise identification of conserved T-cell epitopes is critical for designing effective vaccines. Here...
4.
Haidar-Ahmad N, Tomaro K, Lavallee-Adam M, Campbell-Valois F
mSphere
. 2024 Oct;
9(11):e0055324.
PMID: 39480076
Promiscuous biotin ligases derived from the bacterial enzyme BirA are used to identify proteins vicinal to a bait protein, thereby defining its proxisome. Despite the popularity of this approach, surprisingly...
5.
Baijal K, Abramchuk I, Herrera C, Mah T, Trent M, Lavallee-Adam M, et al.
PLoS Biol
. 2024 Mar;
22(3):e3002558.
PMID: 38478588
Polyphosphates (polyP) are chains of inorganic phosphates that can reach over 1,000 residues in length. In Escherichia coli, polyP is produced by the polyP kinase (PPK) and is thought to...
6.
Davarinejad H, Arvanitis-Vigneault A, Nygard D, Lavallee-Adam M, Couture J
Structure
. 2023 Nov;
32(1):8-17.
PMID: 37922903
Histone reader domains provide a mechanism for sensing states of coordinated nuclear processes marked by histone proteins' post-translational modifications (PTMs). Among a growing number of discovered histone readers, the 14-3-3s,...
7.
Baijal K, Abramchuk I, Herrera C, Trent M, Lavallee-Adam M, Downey M
bioRxiv
. 2023 Jul;
PMID: 37461725
Polyphosphates (polyP) are chains of inorganic phosphates that can reach over 1000 residues in length. In , polyP is produced by the polyP kinase (PPK) and is thought to play...
8.
Hashimoto-Roth E, Surendra A, Lavallee-Adam M, Bennett S, Cuperlovic-Culf M
Bioinformatics
. 2022 Oct;
38(23):5326-5327.
PMID: 36222566
Motivation: Class imbalance, or unequal sample sizes between classes, is an increasing concern in machine learning for metabolomic and lipidomic data mining, which can result in overfitting for the over-represented...
9.
Simopoulos C, Ning Z, Li L, Khamis M, Zhang X, Lavallee-Adam M, et al.
mSystems
. 2022 Aug;
7(4):e0038122.
PMID: 35950762
Metaproteomics is used to explore the functional dynamics of microbial communities. However, acquiring metaproteomic data by tandem mass spectrometry (MS/MS) is time-consuming and resource-intensive, and there is a demand for...
10.
McCarthy L, Abramchuk I, Wafy G, Denoncourt A, Lavallee-Adam M, Downey M
mBio
. 2022 Jul;
13(4):e0039022.
PMID: 35862758
In diverse cells from bacterial to mammalian species, inorganic phosphate is stored in long chains called polyphosphate (polyP). These nearly universal polymers, ranging from three to thousands of phosphate moieties...