Martin Holzer
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Explore the profile of Martin Holzer including associated specialties, affiliations and a list of published articles.
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94
Citations
1259
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Recent Articles
1.
Raharinirina N, Gubela N, Bornigen D, Smith M, Oh D, Budt M, et al.
Nature
. 2025 Jan;
639(8053):196-204.
PMID: 39880955
Since the onset of the pandemic, many SARS-CoV-2 variants have emerged, exhibiting substantial evolution in the virus' spike protein, the main target of neutralizing antibodies. A plausible hypothesis proposes that...
2.
Spott R, Pletz M, Fleischmann-Struzek C, Kimmig A, Hadlich C, Hauert M, et al.
Elife
. 2025 Jan;
13.
PMID: 39812649
Given the rapid cross-country spread of SARS-CoV-2 and the resulting difficulty in tracking lineage spread, we investigated the potential of combining mobile service data and fine-granular metadata (such as postal...
3.
Ritsch M, Eulenfeld T, Lamkiewicz K, Schoen A, Weber F, Holzer M, et al.
Viruses
. 2024 Aug;
16(8).
PMID: 39205184
Bats are ecologically diverse vertebrates characterized by their ability to host a wide range of viruses without apparent illness and the presence of numerous endogenous viral elements (EVEs). EVEs are...
4.
Dabernig-Heinz J, Lohde M, Holzer M, Cabal A, Conzemius R, Brandt C, et al.
J Clin Microbiol
. 2024 Aug;
62(9):e0062824.
PMID: 39158309
Nanopore sequencing has shown the potential to democratize genomic pathogen surveillance due to its ease of use and low entry cost. However, recent genotyping studies showed discrepant results compared to...
5.
Assmann E, Agrawal S, Orschler L, Bottcher S, Lackner S, Holzer M
Gigascience
. 2024 Aug;
13.
PMID: 39115959
Background: Sequencing of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA from wastewater samples has emerged as a valuable tool for detecting the presence and relative abundances of SARS-CoV-2 variants...
6.
Lamkiewicz K, Barf L, Sachse K, Holzer M
Genome Biol
. 2024 Jul;
25(1):170.
PMID: 38951884
Microbial pangenome analysis identifies present or absent genes in prokaryotic genomes. However, current tools are limited when analyzing species with higher sequence diversity or higher taxonomic orders such as genera...
7.
Liu-Wei W, van der Toorn W, Bohn P, Holzer M, Smyth R, von Kleist M
BMC Genomics
. 2024 May;
25(1):528.
PMID: 38807060
Background: Direct RNA sequencing (dRNA-seq) on the Oxford Nanopore Technologies (ONT) platforms can produce reads covering up to full-length gene transcripts, while containing decipherable information about RNA base modifications and...
8.
Hunt M, Hinrichs A, Anderson D, Karim L, Dearlove B, Knaggs J, et al.
bioRxiv
. 2024 May;
PMID: 38746185
The SARS-CoV-2 genome occupies a unique place in infection biology - it is the most highly sequenced genome on earth (making up over 20% of public sequencing datasets) with fine...
9.
Lataretu M, Drechsel O, Kmiecinski R, Trappe K, Holzer M, Fuchs S
F1000Res
. 2024 May;
12:1091.
PMID: 38716230
Background: Accurate genome sequences form the basis for genomic surveillance programs, the added value of which was impressively demonstrated during the COVID-19 pandemic by tracing transmission chains, discovering new viral...
10.
Holzer M
Bioinformatics
. 2024 Apr;
40(4).
PMID: 38561180
Summary: Sequence technology advancements have led to an exponential increase in bacterial genomes, necessitating robust taxonomic classification methods. The Percentage Of Conserved Proteins (POCP), proposed initially by Qin et al....