Marcin Imielinski
Overview
Explore the profile of Marcin Imielinski including associated specialties, affiliations and a list of published articles.
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83
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19995
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Recent Articles
1.
Chukwu W, Lee S, Crane A, Zhang S, Webster S, Dakhama O, et al.
Cell Rep Methods
. 2025 Mar;
:100991.
PMID: 40081367
Although several recent studies have characterized structural variants (SVs) in germline and cancer genomes independently, the genomic contexts of these SVs have not been comprehensively compared. We examined similarities and...
2.
Liu Y, Lankadasari M, Rosiene J, Johnson K, Zhou J, Bapat S, et al.
Cell Rep Med
. 2024 Oct;
5(10):101777.
PMID: 39413736
Approximately 50% of patients with surgically resected early-stage lung cancer develop distant metastasis. At present, there is no in vivo metastasis model to investigate the biology of human lung cancer...
3.
Widman A, Shah M, Frydendahl A, Halmos D, Khamnei C, Ogaard N, et al.
Nat Med
. 2024 Jun;
30(6):1655-1666.
PMID: 38877116
In solid tumor oncology, circulating tumor DNA (ctDNA) is poised to transform care through accurate assessment of minimal residual disease (MRD) and therapeutic response monitoring. To overcome the sparsity of...
4.
Zhang T, Sang J, Hoang P, Zhao W, Rosenbaum J, Johnson K, et al.
bioRxiv
. 2024 Apr;
PMID: 38617360
APOBEC enzymes are part of the innate immunity and are responsible for restricting viruses and retroelements by deaminating cytosine residues. Most solid tumors harbor different levels of somatic mutations attributed...
5.
Chukwu W, Lee S, Crane A, Zhang S, Webster S, Mittra I, et al.
bioRxiv
. 2023 Dec;
PMID: 38106141
Although several recent studies have characterized structural variants (SVs) in germline and cancer genomes, the features of SVs in these different contexts have not been directly compared. We examined similarities...
6.
Choo Z, Behr J, Deshpande A, Hadi K, Yao X, Tian H, et al.
Nat Genet
. 2023 Nov;
55(12):2139-2148.
PMID: 37945902
Short-read sequencing is the workhorse of cancer genomics yet is thought to miss many structural variants (SVs), particularly large chromosomal alterations. To characterize missing SVs in short-read whole genomes, we...
7.
The importance of escalating molecular diagnostics in patients with low-grade pediatric brain cancer
Al Assaad M, Gundem G, Liechty B, Sboner A, Medina J, Papaemmanuil E, et al.
Cold Spring Harb Mol Case Stud
. 2023 Aug;
9(4).
PMID: 37652664
Pilocytic astrocytomas are the most common pediatric brain tumors, typically presenting as low-grade neoplasms. We report two cases of pilocytic astrocytoma with atypical tumor progression. Case 1 involves a 12-yr-old...
8.
Setton J, Hadi K, Choo Z, Kuchin K, Tian H, Da Cruz Paula A, et al.
Nature
. 2023 Aug;
621(7977):129-137.
PMID: 37587346
Homologous recombination (HR) deficiency is associated with DNA rearrangements and cytogenetic aberrations. Paradoxically, the types of DNA rearrangements that are specifically associated with HR-deficient cancers only minimally affect chromosomal structure....
9.
10.
Maura F, Ziccheddu B, Xiang J, Bhinder B, Rosiene J, Abascal F, et al.
Blood Cancer Discov
. 2023 Feb;
4(3):208-227.
PMID: 36723991
Significance: Previous studies in cHL were limited to coding sequences and therefore not able to comprehensively decipher the tumor complexity. Here, leveraging cHL whole-genome characterization, we identify driver events and...