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Marc D Auffret

Explore the profile of Marc D Auffret including associated specialties, affiliations and a list of published articles. Areas
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Citations 895
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Recent Articles
1.
Christodoulou C, Kliem K, Auffret M, Humphries D, Kirton P, Jalal H, et al.
J Anim Sci . 2025 Jan; 103. PMID: 39821410
This study investigated the effects of different protein sources on feed intake, nutrient, and energy utilization, growth performance, and enteric methane (CH4) emissions in growing beef cattle, also evaluated against...
2.
Lima J, Martinez-Alvaro M, Mattock J, Auffret M, Duthie C, Cleveland M, et al.
Sci Rep . 2024 Sep; 14(1):20772. PMID: 39237607
The rumen microbiome is the focus of a growing body of research, mostly based on investigation of rumen fluid samples collected once from each animal. Exploring the temporal stability of...
3.
Nguyen T, Martinez-Alvaro M, Lima J, Auffret M, Rutherford K, Simm G, et al.
Front Microbiol . 2023 Nov; 14:1197371. PMID: 38029169
Understanding the relationships between social stress and the gastrointestinal microbiota, and how they influence host health and performance is expected to have many scientific and commercial implementations in different species,...
4.
Miller G, Auffret M, Roehe R, Nisbet H, Martinez-Alvaro M
Front Microbiol . 2023 May; 14:1102400. PMID: 37125186
The ratio of forage to concentrate in cattle feeding has a major influence on the composition of the microbiota in the rumen and on the mass of methane produced. Using...
5.
Martinez-Alvaro M, Auffret M, Duthie C, Dewhurst R, Cleveland M, Watson M, et al.
Commun Biol . 2022 Apr; 5(1):350. PMID: 35414107
Our study provides substantial evidence that the host genome affects the comprehensive function of the microbiome in the rumen of bovines. Of 1,107/225/1,141 rumen microbial genera/metagenome assembled uncultured genomes (RUGs)/genes...
6.
Stergiadis S, Cabeza-Luna I, Mora-Ortiz M, Stewart R, Dewhurst R, Humphries D, et al.
Front Microbiol . 2021 Feb; 11:590441. PMID: 33552010
Milk products are an important component of human diets, with beneficial effects for human health, but also one of the major sources of nutritionally undesirable saturated fatty acids (SFA). Recent...
7.
Snelling T, Auffret M, Duthie C, Stewart R, Watson M, Dewhurst R, et al.
Anim Microbiome . 2021 Jan; 1(1):16. PMID: 33499961
Background: Dietary intake is known to be a driver of microbial community dynamics in ruminants. Beef cattle go through a finishing phase that typically includes very high concentrate ratios in...
8.
Auffret M, Stewart R, Dewhurst R, Duthie C, Watson M, Roehe R
Front Microbiol . 2020 Jun; 11:1229. PMID: 32582125
In this study, cattle offered one high concentrate diet (92% concentrate-8% straw) during two independent trials allowed us to classify 72 animals comprising of two cattle breeds as "Low" or...
9.
Martinez-Alvaro M, Auffret M, Stewart R, Dewhurst R, Duthie C, Rooke J, et al.
Front Microbiol . 2020 May; 11:659. PMID: 32362882
A network analysis including relative abundances of all ruminal microbial genera (archaea, bacteria, fungi, and protists) and their genes was performed to improve our understanding of how the interactions within...
10.
Auffret M, Dewhurst R, Duthie C, Rooke J, Wallace R, Freeman T, et al.
Microbiome . 2019 Nov; 7(1):149. PMID: 31739805
Following publication of the original article [1], the authors reported an error in the Additional file 1.