Makiko Shimoji
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Explore the profile of Makiko Shimoji including associated specialties, affiliations and a list of published articles.
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Articles
23
Citations
260
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Recent Articles
1.
Suzuki R, Saitou N, Matsuari O, Shiota S, Matsumoto T, Akada J, et al.
iScience
. 2022 Jun;
25(7):104477.
PMID: 35720267
A virulence bacterium, , evolved parallel to its host human, therefore, can work as a marker for tracing the human migration. We found . strains indigenous in the southernmost islands...
2.
Takahashi Y, Kongjaimun A, Muto C, Kobayashi Y, Kumagai M, Sakai H, et al.
Front Genet
. 2020 Aug;
11:748.
PMID: 32793284
Loss of pod shattering is one of the most important domestication-related traits in legume crops. The non-shattering phenotypes have been achieved either by disturbed formation of abscission layer between the...
3.
Suzuki R, Satou K, Shiroma A, Shimoji M, Teruya K, Matsumoto T, et al.
Gut Pathog
. 2019 Sep;
11:45.
PMID: 31558915
Background: is a pathogenic bacterium that causes various gastrointestinal diseases in the human stomach. is well adapted to the human stomach but does not easily infect other animals. As a...
4.
Ohki S, Hagi T, Nakano K, Shiroma A, Tamotsu H, Shimoji M, et al.
Microbiol Resour Announc
. 2018 Dec;
7(10).
PMID: 30533613
Enterococcus gilvus CR1, isolated from raw cow's milk, can produce carotenoids. The complete genome sequence of this strain was determined using the PacBio RS II platform. The assembly was found...
5.
Asahina Y, Shiroma A, Nakano K, Tamotsu H, Ashimine N, Shinzato M, et al.
Genome Announc
. 2018 Jul;
6(27).
PMID: 29976610
EG9 is a strain isolated from well-ripened cheese and accelerates free amino acid production during cheese ripening. Its complete genome sequence was determined using the PacBio RS II platform, revealing...
6.
Moriya N, Nakano K, Shiroma A, Shinzato M, Ashimine N, Minami M, et al.
Genome Announc
. 2018 Jun;
6(25).
PMID: 29930046
LQ80 is a strain isolated from liquid feed for pigs. We determined the complete genome sequence of this strain using the PacBio RS II platform. LQ80 contained a single circular...
7.
Ikegami K, Aita Y, Shiroma A, Shimoji M, Tamotsu H, Ashimine N, et al.
Genome Announc
. 2018 May;
6(18).
PMID: 29724849
The complete genome sequence of sp. strain IBARAKI in a -containing culture was determined using the PacBio RS II platform. The genome is a single circular chromosome of 3,693,233 nucleotides...
8.
Nakano K, Minami M, Shinzato M, Shimoji M, Ashimine N, Shiroma A, et al.
Genome Announc
. 2018 Feb;
6(8).
PMID: 29472335
subsp. G50 is a strain with immunostimulating activity, isolated from Napier grass (). We determined the complete genome sequence of this strain using the PacBio RS II platform. The single...
9.
Yohda M, Ikegami K, Aita Y, Kitajima M, Takechi A, Iwamoto M, et al.
Sci Rep
. 2017 May;
7(1):2230.
PMID: 28533514
We have developed and characterized a bacterial consortium that reductively dechlorinates trichloroethene to ethene. Quantitative PCR analysis for the 16S rRNA and reductive dehalogenase genes showed that the consortium is...
10.
Nakano K, Shiroma A, Shimoji M, Tamotsu H, Ashimine N, Ohki S, et al.
Hum Cell
. 2017 Apr;
30(3):149-161.
PMID: 28364362
PacBio RS II is the first commercialized third-generation DNA sequencer able to sequence a single molecule DNA in real-time without amplification. PacBio RS II's sequencing technology is novel and unique,...