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Luke Trinity

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Articles 13
Citations 76
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Recent Articles
1.
Gray M, Trinity L, Stege U, Ponty Y, Will S, Jabbari H
Bioinformatics . 2024 Dec; 41(1). PMID: 39700413
Motivation: Biologically relevant RNA secondary structures are routinely predicted by efficient dynamic programming algorithms that minimize their free energy. Starting from such algorithms, one can devise partition function algorithms, which...
2.
Trinity L, Stege U, Jabbari H
PLoS Comput Biol . 2024 May; 20(5):e1011787. PMID: 38713726
Understanding and targeting functional RNA structures towards treatment of coronavirus infection can help us to prepare for novel variants of SARS-CoV-2 (the virus causing COVID-19), and any other coronaviruses that...
3.
Trinity L, Wark I, Lansing L, Jabbari H, Stege U
PLoS Comput Biol . 2023 Feb; 19(2):e1010922. PMID: 36854032
Multiple coronaviruses including MERS-CoV causing Middle East Respiratory Syndrome, SARS-CoV causing SARS, and SARS-CoV-2 causing COVID-19, use a mechanism known as -1 programmed ribosomal frameshifting (-1 PRF) to replicate. SARS-CoV-2...
4.
Bucini G, Clark E, Merrill S, Langle-Chimal O, Zia A, Koliba C, et al.
Front Vet Sci . 2023 Feb; 9:1067364. PMID: 36744225
The acceleration of animal disease spread worldwide due to increased animal, feed, and human movement has driven a growing body of epidemiological research as well as a deeper interest in...
5.
Liu T, Merrill S, OKeefe A, Clark E, Langle-Chimal O, Trinity L, et al.
Front Vet Sci . 2022 Dec; 9:984945. PMID: 36467649
Background: Effective biosecurity communication of transmission risks and associated protective behaviors can reduce the impacts of infectious diseases in US animal agriculture. Yet, more than 1/5 of animal production workers...
6.
Clark E, Merrill S, Trinity L, Liu T, OKeefe A, Shrum T, et al.
Front Vet Sci . 2022 Oct; 9:962989. PMID: 36262529
Understanding the impact of human behavior on the spread of disease is critical in mitigating outbreak severity. We designed an experimental game that emulated worker decision-making in a swine facility...
7.
Nakhaei-Nejad M, Trinity L, Jabbari H, Pasdar M, Jahroudi N
J Clin Med . 2021 Sep; 10(18). PMID: 34575270
Despite a major interest in understanding how the endothelial cell phenotype is established, the underlying molecular basis of this process is not yet fully understood. We have previously reported the...
8.
Merrill S, Trinity L, Clark E, Shrum T, Koliba C, Zia A, et al.
Front Vet Sci . 2021 Jul; 8:667265. PMID: 34250060
As the Covid-19 pandemic continues worldwide, it has become increasingly clear that effective communication of disease transmission risks associated with protective behaviors is essential, and that communication tactics are not...
9.
Clark E, Merrill S, Trinity L, Bucini G, Cheney N, Langle-Chimal O, et al.
Front Vet Sci . 2021 Feb; 7:556668. PMID: 33537351
Mitigating the spread of disease is crucial for the well-being of agricultural production systems. Implementing biosecurity disease prevention measures can be expensive, so producers must balance the costs of biosecurity...
10.
Trinity L, Merrill S, Clark E, Koliba C, Zia A, Bucini G, et al.
Front Vet Sci . 2020 Apr; 7:130. PMID: 32292792
Disease outbreaks in U.S. animal livestock industries have economic impacts measured in hundreds of millions of dollars per year. Biosecurity, or procedures intended to protect animals against disease, is known...