Liam Paninski
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Explore the profile of Liam Paninski including associated specialties, affiliations and a list of published articles.
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117
Citations
6256
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Recent Articles
1.
Windolf C, Yu H, Paulk A, Meszena D, Munoz W, Boussard J, et al.
Nat Methods
. 2025 Mar;
PMID: 40050699
High-density microelectrode arrays have opened new possibilities for systems neuroscience, but brain motion relative to the array poses challenges for downstream analyses. We introduce DREDge (Decentralized Registration of Electrophysiology Data),...
2.
Park P, Wong-Campos J, Itkis D, Lee B, Qi Y, Davis H, et al.
Nat Commun
. 2025 Feb;
16(1):1333.
PMID: 39905023
Dendrites on neurons support electrical excitations, but the computational significance of these events is not well understood. We developed molecular, optical, and computational tools for all-optical electrophysiology in dendrites. We...
3.
Everett C, Norovich A, Burke J, Whiteway M, Villamayor P, Shih P, et al.
Cell Rep
. 2025 Jan;
44(1):115208.
PMID: 39817907
Outside acoustic communication, little is known about how animals coordinate social turn taking and how the brain drives engagement in these social interactions. Using Siamese fighting fish (Betta splendens), we...
4.
Posani L, Wang S, Muscinelli S, Muscinelli S, Paninski L, Fusi S
bioRxiv
. 2024 Nov;
PMID: 39605683
A long-standing debate in neuroscience concerns whether individual neurons are organized into functionally distinct populations that encode information differently ("categorical" representations [1-3]) and the implications for neural computation. Here, we...
5.
Yu H, Lyu H, Xu E, Windolf C, Lee E, Yang F, et al.
bioRxiv
. 2024 Nov;
PMID: 39574717
Current electrophysiological approaches can track the activity of many neurons, yet it is usually unknown which cell-types or brain areas are being recorded without further molecular or histological analysis. Developing...
6.
Zhang Y, Lyu H, Hurwitz C, Wang S, Findling C, Hubert F, et al.
bioRxiv
. 2024 Sep;
PMID: 39314484
Traditional neural decoders model the relationship between neural activity and behavior within individual trials of a single experimental session, neglecting correlations across trials and sessions. However, animals exhibit similar neural...
7.
Zhang Y, Wang Y, Beneto D, Wang Z, Azabou M, Richards B, et al.
ArXiv
. 2024 Aug;
PMID: 39108295
Neuroscience research has made immense progress over the last decade, but our understanding of the brain remains fragmented and piecemeal: the dream of probing an arbitrary brain region and automatically...
8.
Blau A, Schaffer E, Mishra N, Miska N, Paninski L, Whiteway M
ArXiv
. 2024 Aug;
PMID: 39108294
Action segmentation of behavioral videos is the process of labeling each frame as belonging to one or more discrete classes, and is a crucial component of many studies that investigate...
9.
Biderman D, Whiteway M, Hurwitz C, Greenspan N, Lee R, Vishnubhotla A, et al.
Nat Methods
. 2024 Jun;
21(7):1316-1328.
PMID: 38918605
Contemporary pose estimation methods enable precise measurements of behavior via supervised deep learning with hand-labeled video frames. Although effective in many cases, the supervised approach requires extensive labeling and often...
10.
Ryu J, Nejatbakhsh A, Torkashvand M, Gangadharan S, Seyedolmohadesin M, Kim J, et al.
PLoS Comput Biol
. 2024 May;
20(5):e1012075.
PMID: 38768230
Tracking body parts in behaving animals, extracting fluorescence signals from cells embedded in deforming tissue, and analyzing cell migration patterns during development all require tracking objects with partially correlated motion....