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Koji Kadota

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Articles 60
Citations 1368
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Recent Articles
1.
Ichikawa C, Kadota K
MethodsX . 2025 Jan; 14:103149. PMID: 39866202
RNA-seq is a commonly employed methodology for the measurement of transcriptomes, particularly for the identification of differentially expressed genes (DEGs) between different conditions or groups. In a previous report, we...
2.
Makino M, Shimizu K, Kadota K
MethodsX . 2024 Jan; 12:102518. PMID: 38179066
RNA-seq is a tool for measuring gene expression and is commonly used to identify differentially expressed genes (DEGs). Gene clustering has been widely used to classify DEGs with similar expression...
3.
Kadota K, Mikami T, Kohata A, Morimoto J, Sando S, Aikawa K, et al.
Chembiochem . 2023 Jul; 24(21):e202300374. PMID: 37430341
With an increasing demand for macromolecular biotherapeutics, the issue of their poor cell-penetrating abilities requires viable and relevant solutions. Herein, we report tripeptides bearing an amino acid with a perfluoroalkyl...
4.
Aoyama C, Goya R, Suematsu N, Kadota K, Yamamoto Y, Shimegi S
Front Sports Act Living . 2022 Feb; 3:775478. PMID: 35112083
In a table tennis rally, players perform interceptive actions on a moving ball continuously in a short time, such that the acquisition process of visual information is an important determinant...
5.
Osabe T, Shimizu K, Kadota K
BMC Bioinformatics . 2021 Oct; 22(1):511. PMID: 34670485
Background: RNA-seq is a tool for measuring gene expression and is commonly used to identify differentially expressed genes (DEGs). Gene clustering is used to classify DEGs with similar expression patterns...
6.
Aoki T, Kadota K
Motor Control . 2021 Feb; 25(2):283-294. PMID: 33626510
The present study examined the effects of daily activities of the hands on finger motor function in older adults. Maximum tapping frequency with each finger during single-finger tapping and alternate...
7.
Kadota K, Shimizu K
Front Genet . 2020 Oct; 11:941. PMID: 33088280
No abstract available.
8.
Ueda Y, Ohtsuki N, Kadota K, Tezuka A, Nagano A, Kadowaki T, et al.
New Phytol . 2020 Apr; 227(5):1434-1452. PMID: 32343414
Increase in the nitrogen (N)-use efficiency and optimization of N response in crop species are urgently needed. Although transcription factor-based genetic engineering is a promising approach for achieving these goals,...
9.
Osabe T, Shimizu K, Kadota K
Bioinform Biol Insights . 2019 Jul; 13:1177932219860817. PMID: 31312083
Empirical Bayes is a choice framework for differential expression (DE) analysis for multi-group RNA-seq count data. Its characteristic ability to compute posterior probabilities for predefined expression patterns allows users to...
10.
Su W, Sun J, Shimizu K, Kadota K
BMC Res Notes . 2019 Mar; 12(1):133. PMID: 30867032
Objective: Differential expression (DE) is a fundamental step in the analysis of RNA-Seq count data. We had previously developed an R/Bioconductor package (called TCC) for this purpose. While this package...