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Joseph R Peterson

Explore the profile of Joseph R Peterson including associated specialties, affiliations and a list of published articles. Areas
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Articles 15
Citations 116
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Recent Articles
1.
Weitz M, Pfeiffer J, Patel S, Biancalana M, Pekis A, Kannan V, et al.
NPJ Breast Cancer . 2024 Nov; 10(1):98. PMID: 39543194
Surgery remains the primary treatment modality in the management of early-stage invasive breast cancer. Artificial intelligence (AI)-powered visualization platforms offer the compelling potential to aid surgeons in evaluating the tumor's...
2.
Peterson J, Cole J, Pfeiffer J, Norris G, Zhang Y, Lopez-Ramos D, et al.
Breast Cancer Res . 2023 May; 25(1):54. PMID: 37165441
Background: Generalizable population-based studies are unable to account for individual tumor heterogeneity that contributes to variability in a patient's response to physician-chosen therapy. Although molecular characterization of tumors has advanced...
3.
Cook D, Biancalana M, Liadis N, Lopez Ramos D, Zhang Y, Patel S, et al.
Front Artif Intell . 2023 May; 6:1153083. PMID: 37138891
Background: Immuno-oncology (IO) therapies targeting the PD-1/PD-L1 axis, such as immune checkpoint inhibitor (ICI) antibodies, have emerged as promising treatments for early-stage breast cancer (ESBC). Despite immunotherapy's clinical significance, the...
4.
Howard F, He G, Peterson J, Pfeiffer J, Earnest T, Pearson A, et al.
Breast Cancer Res Treat . 2022 Sep; 196(1):57-66. PMID: 36063220
Purpose: Pathologic complete response (pCR) to neoadjuvant chemotherapy (NAC) in early breast cancer (EBC) is largely dependent on breast cancer subtype, but no clinical-grade model exists to predict response and...
5.
Bianchi D, Peterson J, Earnest T, Hallock M, Luthey-Schulten Z
IET Syst Biol . 2021 Jan; 12(4):170-176. PMID: 33451183
It is well known that stochasticity in gene expression is an important source of noise that can have profound effects on the fate of a living cell. In the galactose...
6.
Ghaemi Z, Peterson J, Gruebele M, Luthey-Schulten Z
PLoS Comput Biol . 2020 Mar; 16(3):e1007717. PMID: 32210422
Spatial organization is a characteristic of all cells, achieved in eukaryotic cells by utilizing both membrane-bound and membrane-less organelles. One of the key processes in eukaryotes is RNA splicing, which...
7.
Peterson J, Cole J, Luthey-Schulten Z
PLoS One . 2017 Dec; 12(12):e0190193. PMID: 29261814
[This corrects the article DOI: 10.1371/journal.pone.0182570.].
8.
Peterson J, Cole J, Luthey-Schulten Z
PLoS One . 2017 Aug; 12(8):e0182570. PMID: 28820904
Characterizing the complex spatial and temporal interactions among cells in a biological system (i.e. bacterial colony, microbiome, tissue, etc.) remains a challenge. Metabolic cooperativity in these systems can arise due...
9.
Thor S, Peterson J, Luthey-Schulten Z
Archaea . 2017 Jan; 2017:9763848. PMID: 28133437
Decades of biochemical, bioinformatic, and sequencing data are currently being systematically compiled into genome-scale metabolic reconstructions (GEMs). Such reconstructions are knowledge-bases useful for engineering, modeling, and comparative analysis. Here we...
10.
Peterson J, Thor S, Kohler L, Kohler P, Metcalf W, Luthey-Schulten Z
BMC Genomics . 2016 Nov; 17(1):924. PMID: 27852217
Background: While a few studies on the variations in mRNA expression and half-lives measured under different growth conditions have been used to predict patterns of regulation in bacterial organisms, the...