Jo-Wei Allison Hsieh
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Explore the profile of Jo-Wei Allison Hsieh including associated specialties, affiliations and a list of published articles.
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10
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47
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Recent Articles
1.
Chatterjee D, Zhang Z, Lin P, Wang P, Sidhu G, Yennawar N, et al.
Plant Cell
. 2024 Nov;
37(1).
PMID: 39589935
The basal endosperm transfer layer (BETL) of the maize (Zea mays L.) kernel is composed of transfer cells for nutrient transport to nourish the developing kernel. To understand the spatiotemporal...
2.
Hsieh C, Chang Y, Yen M, Hsieh J, Chen P
Nat Commun
. 2024 Oct;
15(1):9160.
PMID: 39448614
Histone modifications can regulate transcription epigenetically by marking specific genomic loci, which can be mapped using chromatin immunoprecipitation sequencing (ChIP-seq). Here we present QHistone, a predictive database of 1534 ChIP-seqs...
3.
Hsieh J, Yen M, Hung F, Wu K, Chen P
Plant Physiol
. 2024 Jul;
196(3):1939-1952.
PMID: 39041412
Arabidopsis (Arabidopsis thaliana) HISTONE DEACETYLASE 6 (HDA6) and HISTONE DEMETHYLASES LSD-LIKE 1 (LDL1) and LDL2 synergistically regulate the expression of long non-coding RNAs associated with H3Ac and H3K4me2. The underlying...
4.
Hsieh J, Lin P, Wang C, Lee Y, Chang P, Lu R, et al.
Front Plant Sci
. 2024 Jun;
15:1370618.
PMID: 38863553
The advent of next-generation sequencing in crop improvement offers unprecedented insights into the chromatin landscape closely linked to gene activity governing key traits in plant development and adaptation. Particularly in...
5.
Chen Y, Hsieh J, Kuo S, Kao C, Tung C, Yu J, et al.
Genome Biol
. 2024 Apr;
25(1):85.
PMID: 38570851
Cell type annotation and lineage construction are two of the most critical tasks conducted in the analyses of single-cell RNA sequencing (scRNA-seq). Four recent scRNA-seq studies of differentiating xylem propose...
6.
Hsieh J, Chang P, Kuang L, Hsing Y, Chen P
Plant Physiol
. 2023 Jul;
193(2):1297-1312.
PMID: 37394940
During transgenic plant production, tissue culture often carries epigenetic, and genetic changes that underlie somaclonal variations, leading to unpredictable phenotypes. Additionally, specific treatments for rice (Oryza sativa) transformation processes may...
7.
Tu Y, Chen C, Huang Y, Chang C, Yen M, Hsieh J, et al.
Plant Physiol
. 2022 Jun;
190(1):882-897.
PMID: 35670741
Histone deacetylases (HDAs) play an important role in transcriptional regulation of multiple biological processes. In this study, we investigated the function of HDA15 in abscisic acid (ABA) responses. We used...
8.
Hung F, Chen C, Yen M, Hsieh J, Li C, Shih Y, et al.
NAR Genom Bioinform
. 2021 Feb;
2(3):lqaa066.
PMID: 33575615
In recent years, eukaryotic long non-coding RNAs (lncRNAs) have been identified as important factors involved in a wide variety of biological processes, including histone modification, alternative splicing and transcription enhancement....
9.
Ke H, Lee H, Lin C, Liu Y, Lu M, Hsieh J, et al.
Proc Natl Acad Sci U S A
. 2020 Nov;
117(49):31267-31277.
PMID: 33229585
Mushroom-forming fungi in the order Agaricales represent an independent origin of bioluminescence in the tree of life; yet the diversity, evolutionary history, and timing of the origin of fungal luciferases...
10.
Hsieh J, Yen M, Chen P
Genomics
. 2020 Apr;
112(5):3549-3559.
PMID: 32298708
Epigenetic regulation by DNA methylation and histone marks is crucial to plant development. In Arabidopsis, the otu5 mutant exhibited altered root phenotypes resembling those of phosphate-deficient plants. In low phosphate...