Jerome Kelleher
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Explore the profile of Jerome Kelleher including associated specialties, affiliations and a list of published articles.
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29
Citations
1112
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Recent Articles
1.
Fritze H, Pope N, Kelleher J, Ralph P
bioRxiv
. 2025 Mar;
PMID: 40060605
Foreshadowing haplotype-based methods of the genomics era, it is an old observation that the "junction" between two distinct haplotypes produced by recombination is inherited as a Mendelian marker. In a...
2.
Bisschop G, Kelleher J, Ralph P
bioRxiv
. 2025 Mar;
PMID: 40060524
Ancestral recombination graphs (ARGs) are the focus of much ongoing research interest. Recent progress in inference has made ARG-based approaches feasible across of range of applications, and many new methods...
3.
Huang Z, Kelleher J, Chan Y, Balding D
PLoS Genet
. 2025 Jan;
21(1):e1011537.
PMID: 39778081
Inference of evolutionary and demographic parameters from a sample of genome sequences often proceeds by first inferring identical-by-descent (IBD) genome segments. By exploiting efficient data encoding based on the ancestral...
4.
Wong Y, Ignatieva A, Koskela J, Gorjanc G, Wohns A, Kelleher J
Genetics
. 2024 Jul;
228(1).
PMID: 39013109
As a result of recombination, adjacent nucleotides can have different paths of genetic inheritance and therefore the genealogical trees for a sample of DNA sequences vary along the genome. The...
5.
Czech E, Millar T, Tyler W, White T, Elsworth B, Guez J, et al.
bioRxiv
. 2024 Jun;
PMID: 38915693
Background: Variant Call Format (VCF) is the standard file format for interchanging genetic variation data and associated quality control metrics. The usual row-wise encoding of the VCF data model (either...
6.
Tagami D, Bisschop G, Kelleher J
Bioinformatics
. 2024 May;
40(6).
PMID: 38796683
Summary: Ancestral recombination graphs (ARGs) encode the ensemble of correlated genealogical trees arising from recombination in a compact and efficient structure and are of fundamental importance in population and statistical...
7.
Huang Z, Kelleher J, Chan Y, Balding D
bioRxiv
. 2024 Apr;
PMID: 38559261
Inference of demographic and evolutionary parameters from a sample of genome sequences often proceeds by first inferring identical-by-descent (IBD) genome segments. By exploiting efficient data encoding based on the ancestral...
8.
Tagami D, Bisschop G, Kelleher J
bioRxiv
. 2024 Apr;
PMID: 38559118
Summary: Ancestral recombination graphs (ARGs) encode the ensemble of correlated genealogical trees arising from recombination in a compact and efficient structure, and are of fundamental importance in population and statistical...
9.
Tsambos G, Kelleher J, Ralph P, Leslie S, Vukcevic D
Bioinform Adv
. 2023 Nov;
3(1):vbad163.
PMID: 38033661
Summary: It is challenging to simulate realistic tracts of genetic ancestry on a scale suitable for simulation-based inference. We present an algorithm that enables this information to be extracted efficiently...
10.
Wong Y, Ignatieva A, Koskela J, Gorjanc G, Wohns A, Kelleher J
bioRxiv
. 2023 Nov;
PMID: 37961279
As a result of recombination, adjacent nucleotides can have different paths of genetic inheritance and therefore the genealogical trees for a sample of DNA sequences vary along the genome. The...