Jeffry M Gaston
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Explore the profile of Jeffry M Gaston including associated specialties, affiliations and a list of published articles.
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3
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103
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Recent Articles
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Gaston J, Alm E, Zhang A
Genome Biol
. 2025 Jan;
26(1):15.
PMID: 39844205
Sequence alignment is foundational to many bioinformatic analyses. Many aligners start by splitting sequences into contiguous, fixed-length seeds, called k-mers. Alignment is faster with longer, unique seeds, but more accurate...
3.
Zhang A, Gaston J, Cardenas P, Zhao S, Gu X, Alm E
Cell Genom
. 2024 Dec;
5(1):100725.
PMID: 39719706
Host-parasite relationships drive the evolution of both parties. In microbe-phage dynamics, CRISPR functions as an adaptive defense mechanism, updating immunity via spacer acquisition. Here, we investigated these interactions within the...
4.
Gaston J, Alm E, Zhang A
BMC Biol
. 2024 Apr;
22(1):90.
PMID: 38644496
Background: Accurate identification of genetic variants, such as point mutations and insertions/deletions (indels), is crucial for various genetic studies into epidemic tracking, population genetics, and disease diagnosis. Genetic studies into...
5.
Zhang A, Gaston J, Dai C, Zhao S, Poyet M, Groussin M, et al.
Nat Commun
. 2021 Aug;
12(1):4765.
PMID: 34362925
Antibiotic resistance genes (ARGs) are widespread among bacteria. However, not all ARGs pose serious threats to public health, highlighting the importance of identifying those that are high-risk. Here, we developed...