James N Glosli
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Explore the profile of James N Glosli including associated specialties, affiliations and a list of published articles.
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14
Citations
100
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Recent Articles
1.
Shrestha R, Carpenter T, Van Q, Agamasu C, Tonelli M, Aydin F, et al.
Commun Biol
. 2024 Apr;
7(1):445.
PMID: 38605143
No abstract available.
2.
Shrestha R, Carpenter T, Van Q, Agamasu C, Tonelli M, Aydin F, et al.
Commun Biol
. 2024 Feb;
7(1):242.
PMID: 38418613
The oncogene RAS, extensively studied for decades, presents persistent gaps in understanding, hindering the development of effective therapeutic strategies due to a lack of precise details on how RAS initiates...
3.
Ingolfsson H, Bhatia H, Aydin F, Oppelstrup T, Lopez C, Stanton L, et al.
J Chem Theory Comput
. 2023 Apr;
19(9):2658-2675.
PMID: 37075065
Interdependence across time and length scales is common in biology, where atomic interactions can impact larger-scale phenomenon. Such dependence is especially true for a well-known cancer signaling pathway, where the...
4.
Nguyen K, Lopez C, Neale C, Van Q, Carpenter T, Di Natale F, et al.
Biophys J
. 2022 Jul;
121(19):3630-3650.
PMID: 35778842
During the activation of mitogen-activated protein kinase (MAPK) signaling, the RAS-binding domain (RBD) and cysteine-rich domain (CRD) of RAF bind to active RAS at the plasma membrane. The orientation of...
5.
Ingolfsson H, Neale C, Carpenter T, Shrestha R, Lopez C, Tran T, et al.
Proc Natl Acad Sci U S A
. 2022 Jan;
119(1).
PMID: 34983849
RAS is a signaling protein associated with the cell membrane that is mutated in up to 30% of human cancers. RAS signaling has been proposed to be regulated by dynamic...
6.
Zhang X, Sundram S, Oppelstrup T, Kokkila-Schumacher S, Carpenter T, Ingolfsson H, et al.
J Chem Phys
. 2020 Aug;
153(4):045103.
PMID: 32752727
We have implemented the Martini force field within Lawrence Livermore National Laboratory's molecular dynamics program, ddcMD. The program is extended to a heterogeneous programming model so that it can exploit...
7.
Cranford J, OHara T, Villongco C, Hafez O, Blake R, Loscalzo J, et al.
Cardiovasc Eng Technol
. 2018 Mar;
9(3):447-467.
PMID: 29549620
Patient-specific models of the ventricular myocardium, combined with the computational power to run rapid simulations, are approaching the level where they could be used for personalized cardiovascular medicine. A major...
8.
Dharuman G, Stanton L, Glosli J, Murillo M
J Chem Phys
. 2017 Jan;
146(2):024112.
PMID: 28088145
Medium-range interactions occur in a wide range of systems, including charged-particle systems with varying screening lengths. We generalize the Ewald method to charged systems described by interactions involving an arbitrary...
9.
Richards D, Glosli J, Draeger E, Mirin A, Chan B, Fattebert J, et al.
Comput Methods Biomech Biomed Engin
. 2013 Jun;
16(7):802-5.
PMID: 23734785
We have developed the capability to rapidly simulate cardiac electrophysiological phenomena in a human heart discretised at a resolution comparable with the length of a cardiac myocyte. Previous scientific investigation...
10.
Benedict L, Surh M, Castor J, Khairallah S, Whitley H, Richards D, et al.
Phys Rev E Stat Nonlin Soft Matter Phys
. 2012 Dec;
86(4 Pt 2):046406.
PMID: 23214699
We study the problem of electron-ion temperature equilibration in plasmas. We consider pure H at various densities and temperatures and Ar-doped H at temperatures high enough so that the Ar...