James M Birch
Overview
Explore the profile of James M Birch including associated specialties, affiliations and a list of published articles.
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Articles
16
Citations
193
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Recent Articles
1.
Nowinski B, Feng X, Preston C, Birch J, Luo H, Whitman W, et al.
ISME J
. 2023 Mar;
17(6):813-822.
PMID: 36871069
Identifying mechanisms by which bacterial species evolve and maintain genomic diversity is particularly challenging for the uncultured lineages that dominate the surface ocean. A longitudinal analysis of bacterial genes, genomes,...
2.
Miller E, Yamahara K, French C, Spingarn N, Birch J, Van Houtan K
Sci Data
. 2022 Dec;
9(1):780.
PMID: 36566263
Microplastics have been extensively documented in marine ecosystems and food webs with devastating impacts. To solve this global crisis, identifying the polymer composition is key for resolving the material origin,...
3.
Zhang Y, Ryan J, Hobson B, Kieft B, Romano A, Barone B, et al.
Sci Robot
. 2021 May;
6(50).
PMID: 34043577
The deep chlorophyll maximum (DCM) layer is an ecologically important feature of the open ocean. The DCM cannot be observed using aerial or satellite remote sensing; thus, in situ observations...
4.
Sepulveda A, Birch J, Barnhart E, Merkes C, Yamahara K, Marin 3rd R, et al.
Sci Rep
. 2020 Sep;
10(1):14389.
PMID: 32873867
Autonomous water sampling technologies may help to overcome the human resource challenges of monitoring biological threats to rivers over long time periods and across large geographic areas. The Monterey Bay...
5.
Nowinski B, Smith C, Thomas C, Esson K, Marin 3rd R, Preston C, et al.
Sci Data
. 2019 Jul;
6(1):129.
PMID: 31332186
Metagenomic and metatranscriptomic time-series data covering a 52-day period in the fall of 2016 provide an inventory of bacterial and archaeal community genes, transcripts, and taxonomy during an intense dinoflagellate...
6.
Nowinski B, Motard-Cote J, Landa M, Preston C, Scholin C, Birch J, et al.
Environ Microbiol
. 2019 Feb;
21(5):1687-1701.
PMID: 30761723
Dimethylsulfoniopropionate (DMSP) is an abundant organic sulfur metabolite produced by many phytoplankton species and degraded by bacteria via two distinct pathways with climate-relevant implications. We assessed the diversity and abundance...
7.
Bowers H, Ryan J, Hayashi K, Woods A, Marin 3rd R, Smith G, et al.
Harmful Algae
. 2018 Sep;
78:129-141.
PMID: 30196920
Monterey Bay, California experiences near-annual blooms of Pseudo-nitzschia that can affect marine animal health and the economy, including impacts to tourism and commercial/recreational fisheries. One species in particular, P. australis,...
8.
Bowers H, Marin 3rd R, Birch J, Scholin C
Harmful Algae
. 2017 Nov;
70:37-51.
PMID: 29169567
New sandwich hybridization assay (SHA) probes for detecting Pseudo-nitzschia species (P. arenysensis, P. fraudulenta, P. hasleana, P. pungens) are presented, along with updated cross-reactivity information on historical probes (SHA and...
9.
Olins H, Rogers D, Preston C, Ussler 3rd W, Pargett D, Jensen S, et al.
Front Microbiol
. 2017 Jun;
8:1042.
PMID: 28659879
Despite years of research into microbial activity at diffuse flow hydrothermal vents, the extent of microbial niche diversity in these settings is not known. To better understand the relationship between...
10.
Bowers H, Marin 3rd R, Birch J, Scholin C, Doucette G
J Phycol
. 2016 Mar;
52(1):135-40.
PMID: 26987095
Many species within the diatom genus Pseudo-nitzschia are difficult to distinguish without applying molecular analytical or microscopy-based methods. DNA, antibody and lectin probes have previously been used to provide rapid...