Hamid Mirebrahim
Overview
Explore the profile of Hamid Mirebrahim including associated specialties, affiliations and a list of published articles.
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Articles
6
Citations
144
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Recent Articles
1.
Braun J, Hill E, Contreras E, Yasuda M, Morgan A, Ditelberg S, et al.
bioRxiv
. 2025 Jan;
PMID: 39829775
Antibodies and helper T cells play important roles in SARS-CoV-2 infection and vaccination. We sequenced B- and T-cell receptor repertoires (BCR/TCR) from the blood of 251 infectees, vaccinees, and controls...
2.
Schneider-Hohendorf T, Wunsch C, Falk S, Raposo C, Rubelt F, Mirebrahim H, et al.
Brain
. 2024 Jul;
148(3):933-940.
PMID: 39021292
Epstein-Barr virus (EBV) infection has long been associated with the development of multiple sclerosis (MS). Patients with MS have elevated titres of EBV-specific antibodies in serum and show signs of...
3.
Alhakami H, Mirebrahim H, Lonardi S
Genome Biol
. 2017 May;
18(1):93.
PMID: 28521789
Background: The majority of eukaryotic genomes are unfinished due to the algorithmic challenges of assembling them. A variety of assembly and scaffolding tools are available, but it is not always...
4.
Munoz-Amatriain M, Mirebrahim H, Xu P, Wanamaker S, Luo M, Alhakami H, et al.
Plant J
. 2016 Oct;
89(5):1042-1054.
PMID: 27775877
Cowpea (Vigna unguiculata L. Walp.) is a legume crop that is resilient to hot and drought-prone climates, and a primary source of protein in sub-Saharan Africa and other parts of...
5.
Munoz-Amatriain M, Lonardi S, Luo M, Madishetty K, Svensson J, Moscou M, et al.
Plant J
. 2015 Aug;
84(1):216-27.
PMID: 26252423
Barley (Hordeum vulgare L.) possesses a large and highly repetitive genome of 5.1 Gb that has hindered the development of a complete sequence. In 2012, the International Barley Sequencing Consortium...
6.
Mirebrahim H, Close T, Lonardi S
Bioinformatics
. 2015 Jun;
31(12):i9-16.
PMID: 26072514
Unlabelled: We introduce a new divide and conquer approach to deal with the problem of de novo genome assembly in the presence of ultra-deep sequencing data (i.e. coverage of 1000x...
7.
Lonardi S, Mirebrahim H, Wanamaker S, Alpert M, Ciardo G, Duma D, et al.
Bioinformatics
. 2015 May;
31(18):2972-80.
PMID: 25995232
Motivation: As the invention of DNA sequencing in the 70s, computational biologists have had to deal with the problem of de novo genome assembly with limited (or insufficient) depth of...