Gael Varoquaux
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Explore the profile of Gael Varoquaux including associated specialties, affiliations and a list of published articles.
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96
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Recent Articles
1.
Doutreligne M, Struja T, Abecassis J, Morgand C, Celi L, Varoquaux G
PLOS Digit Health
. 2025 Feb;
4(2):e0000721.
PMID: 39899627
Causal inference enables machine learning methods to estimate treatment effects of medical interventions from electronic health records (EHRs). The prevalence of such observational data and the difficulty for randomized controlled...
2.
Poldrack R, Markiewicz C, Appelhoff S, Ashar Y, Auer T, Baillet S, et al.
Imaging Neurosci (Camb)
. 2024 Sep;
2:1-19.
PMID: 39308505
The Brain Imaging Data Structure (BIDS) is a community-driven standard for the organization of data and metadata from a growing range of neuroscience modalities. This paper is meant as a...
3.
Pinho A, Richard H, Ponce A, Eickenberg M, Amadon A, Dohmatob E, et al.
Sci Data
. 2024 Jun;
11(1):590.
PMID: 38839770
The Individual Brain Charting (IBC) is a multi-task functional Magnetic Resonance Imaging dataset acquired at high spatial-resolution and dedicated to the cognitive mapping of the human brain. It consists in...
4.
Maier-Hein L, Reinke A, Godau P, Tizabi M, Buettner F, Christodoulou E, et al.
Nat Methods
. 2024 Feb;
21(2):195-212.
PMID: 38347141
Increasing evidence shows that flaws in machine learning (ML) algorithm validation are an underestimated global problem. In biomedical image analysis, chosen performance metrics often do not reflect the domain interest,...
5.
Reinke A, Tizabi M, Baumgartner M, Eisenmann M, Heckmann-Notzel D, Kavur A, et al.
Nat Methods
. 2024 Feb;
21(2):182-194.
PMID: 38347140
Validation metrics are key for tracking scientific progress and bridging the current chasm between artificial intelligence research and its translation into practice. However, increasing evidence shows that, particularly in image...
6.
Poldrack R, Markiewicz C, Appelhoff S, Ashar Y, Auer T, Baillet S, et al.
ArXiv
. 2023 Sep;
PMID: 37744469
The Brain Imaging Data Structure (BIDS) is a community-driven standard for the organization of data and metadata from a growing range of neuroscience modalities. This paper is meant as a...
7.
Reinke A, Tizabi M, Baumgartner M, Eisenmann M, Heckmann-Notzel D, Kavur A, et al.
ArXiv
. 2023 Mar;
PMID: 36945687
Validation metrics are key for the reliable tracking of scientific progress and for bridging the current chasm between artificial intelligence (AI) research and its translation into practice. However, increasing evidence...
8.
Kobeleva X, Varoquaux G, Dagher A, Adhikari M, Grefkes C, Gilson M
Neuroimage Clin
. 2022 Dec;
36:103262.
PMID: 36451365
Functional magnetic resonance imaging (fMRI) captures information on brain function beyond the anatomical alterations that are traditionally visually examined by neuroradiologists. However, the fMRI signals are complex in addition to...
9.
Petria I, Albuquerque S, Varoquaux G, Vie J, Venteclef N, Mohammedi K, et al.
Cardiovasc Diabetol
. 2022 Nov;
21(1):247.
PMID: 36397092
Background: Cardiovascular risk and body-weight management are both emerging challenges of type 1 diabetes care. We evaluated the association between intraindividual variability of body-weight and risk of cardiovascular events in...
10.
Vieira B, Liem F, Dadi K, Engemann D, Gramfort A, Bellec P, et al.
Neurobiol Aging
. 2022 Jul;
118:55-65.
PMID: 35878565
Previous literature has focused on predicting a diagnostic label from structural brain imaging. Since subtle changes in the brain precede a cognitive decline in healthy and pathological aging, our study...