Fabricia F Nascimento
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Explore the profile of Fabricia F Nascimento including associated specialties, affiliations and a list of published articles.
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15
Citations
1056
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Recent Articles
1.
Kotokwe K, Nascimento F, Moyo S, Gaseitsiwe S, Pretorius Holme M, Makhema J, et al.
Res Sq
. 2024 Nov;
PMID: 39483888
Background: Studying viral sequences can provide insights into the structure of host contact networks through which the virus is transmitted. Uncovering the population structure of the HIV-1 epidemic in Botswana...
2.
Assessing transmission attribution risk from simulated sequencing data in HIV molecular epidemiology
Nascimento F, Mehta S, Little S, Volz E
AIDS
. 2023 Dec;
38(6):865-873.
PMID: 38126363
Background: HIV molecular epidemiology (ME) is the analysis of sequence data together with individual-level clinical, demographic, and behavioral data to understand HIV epidemiology. The use of ME has raised concerns...
3.
Nascimento F, Ragonnet-Cronin M, Golubchik T, Danaviah S, Derache A, Fraser C, et al.
Wellcome Open Res
. 2023 Jun;
7:174.
PMID: 37333843
South Africa has the largest number of people living with HIV (PLWHIV) in the world, with HIV prevalence and transmission patterns varying greatly between provinces. Transmission between regions is still...
4.
Alvarez-Carretero S, Tamuri A, Battini M, Nascimento F, Carlisle E, Asher R, et al.
Nature
. 2021 Dec;
602(7896):263-267.
PMID: 34937052
High-throughput sequencing projects generate genome-scale sequence data for species-level phylogenies. However, state-of-the-art Bayesian methods for inferring timetrees are computationally limited to small datasets and cannot exploit the growing number of...
5.
Ragonnet-Cronin M, Boyd O, Geidelberg L, Jorgensen D, Nascimento F, Siveroni I, et al.
Nat Commun
. 2021 Apr;
12(1):2188.
PMID: 33846321
Unprecedented public health interventions including travel restrictions and national lockdowns have been implemented to stem the COVID-19 epidemic, but the effectiveness of non-pharmaceutical interventions is still debated. We carried out...
6.
Geidelberg L, Boyd O, Jorgensen D, Siveroni I, Nascimento F, Johnson R, et al.
Virus Evol
. 2021 Mar;
7(1):veaa102.
PMID: 33747543
Analysis of genetic sequence data from the SARS-CoV-2 pandemic can provide insights into epidemic origins, worldwide dispersal, and epidemiological history. With few exceptions, genomic epidemiological analysis has focused on geographically...
7.
Nouvellet P, Bhatia S, Cori A, Ainslie K, Baguelin M, Bhatt S, et al.
Nat Commun
. 2021 Feb;
12(1):1090.
PMID: 33597546
In response to the COVID-19 pandemic, countries have sought to control SARS-CoV-2 transmission by restricting population movement through social distancing interventions, thus reducing the number of contacts. Mobility data represent...
8.
Volz E, Hill V, McCrone J, Price A, Jorgensen D, OToole A, et al.
Cell
. 2020 Dec;
184(1):64-75.e11.
PMID: 33275900
Global dispersal and increasing frequency of the SARS-CoV-2 spike protein variant D614G are suggestive of a selective advantage but may also be due to a random founder effect. We investigate...
9.
Nascimento F, Baral S, Geidelberg L, Mukandavire C, Schwartz S, Turpin G, et al.
Epidemics
. 2019 Nov;
30:100376.
PMID: 31767497
Surveillance of HIV epidemics in key populations and in developing countries is often challenging due to sparse, incomplete, or low-quality data. Analysis of HIV sequence data can provide an alternative...
10.
Nascimento F, Dos Reis M, Yang Z
Nat Ecol Evol
. 2017 Oct;
1(10):1446-1454.
PMID: 28983516
Bayesian methods have become very popular in molecular phylogenetics due to the availability of user-friendly software implementing sophisticated models of evolution. However, Bayesian phylogenetic models are complex, and analyses are...