Ernesto Contreras-Torres
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Explore the profile of Ernesto Contreras-Torres including associated specialties, affiliations and a list of published articles.
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13
Citations
58
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Recent Articles
1.
Contreras-Torres E, Marrero-Ponce Y
J Chem Inf Model
. 2024 Nov;
64(23):8665-8672.
PMID: 39552512
Several computational tools have been developed to calculate sequence-based molecular descriptors (MDs) for peptides and proteins. However, these tools have certain limitations: 1) They generally lack capabilities for curating input...
2.
Castillo-Mendieta K, Aguero-Chapin G, Mora J, Perez N, Contreras-Torres E, Valdes-Martini J, et al.
Toxicol Sci
. 2024 Sep;
202(2):236-249.
PMID: 39254655
Peptides have emerged as promising therapeutic agents. However, their potential is hindered by hemotoxicity. Understanding the hemotoxicity of peptides is crucial for developing safe and effective peptide-based therapeutics. Here, we...
3.
Mora J, Marquez E, Perez-Perez N, Contreras-Torres E, Perez-Castillo Y, Aguero-Chapin G, et al.
J Comput Aided Mol Des
. 2024 Feb;
38(1):9.
PMID: 38351144
Notwithstanding the wide adoption of the OECD principles (or best practices) for QSAR modeling, disparities between in silico predictions and experimental results are frequent, suggesting that model predictions are often...
4.
Aguero-Chapin G, Antunes A, Mora J, Perez N, Contreras-Torres E, Valdes-Martini J, et al.
Antibiotics (Basel)
. 2023 Apr;
12(4).
PMID: 37107109
Microbial biofilms cause several environmental and industrial issues, even affecting human health. Although they have long represented a threat due to their resistance to antibiotics, there are currently no approved...
5.
Cabrera N, Cuesta S, Mora J, Paz J, Marquez E, Espinoza-Montero P, et al.
Sci Rep
. 2022 Nov;
12(1):19969.
PMID: 36402831
Primary hyperoxaluria type 1 (PHT1) treatment is mainly focused on inhibiting the enzyme glycolate oxidase, which plays a pivotal role in the production of glyoxylate, which undergoes oxidation to produce...
6.
Contreras-Torres E, Marrero-Ponce Y, Teran J, Aguero-Chapin G, Antunes A, Garcia-Jacas C
Front Chem
. 2022 Oct;
10:959143.
PMID: 36277354
This study introduces a set of three-dimensional (3D) multi-linear descriptors for proteins. These indices codify geometric structural information from kth spatial-(dis)similarity two-tuple and three-tuple tensors. The coefficients of these truncated...
7.
Contreras-Torres E, Marrero-Ponce Y, Teran J, Garcia-Jacas C, Brizuela C, Sanchez-Rodriguez J
J Chem Inf Model
. 2019 Oct;
60(2):1042-1059.
PMID: 31663741
This report introduces the software (acronym for lti-near ap based on -Metric and ntact atrices of 3D rotein and mino-acid weighting), designed to compute tensor-based 3D protein structural descriptors by...
8.
Marrero-Ponce Y, Teran J, Contreras-Torres E, Garcia-Jacas C, Perez-Castillo Y, Cubillan N, et al.
J Theor Biol
. 2019 Oct;
485:110039.
PMID: 31589877
Novel 3D protein descriptors based on bilinear, quadratic and linear algebraic maps in R are proposed. The latter employs the k 2-tuple (dis) similarity matrix to codify information related to...
9.
Teran J, Marrero-Ponce Y, Contreras-Torres E, Garcia-Jacas C, Vivas-Reyes R, Teran E, et al.
Sci Rep
. 2019 Aug;
9(1):11391.
PMID: 31388082
In this report, a new type of tridimensional (3D) biomacro-molecular descriptors for proteins are proposed. These descriptors make use of multi-linear algebra concepts based on the application of 3-linear forms...
10.
Contreras-Torres E
J Theor Biol
. 2018 Jun;
454:139-145.
PMID: 29870696
In this study, I introduce novel global and local 0D-protein descriptors based on a statistical quantity named Total Sum of Squares (TSS). This quantity represents the sum of the squares...