Eric E Allen
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Explore the profile of Eric E Allen including associated specialties, affiliations and a list of published articles.
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84
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3972
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Recent Articles
1.
Neu A, Torchin M, Allen E, Roy K
Appl Environ Microbiol
. 2024 Oct;
90(11):e0100324.
PMID: 39480095
The rise of the Isthmus of Panama separated the populations of many marine organisms, which then diverged into new geminate sister species currently living in the Eastern Pacific Ocean and...
2.
Oliver A, Podell S, Wegley Kelly L, Sparagon W, Plominsky A, Nelson R, et al.
mBio
. 2024 Mar;
15(5):e0049624.
PMID: 38534158
Coastal herbivorous fishes consume macroalgae, which is then degraded by microbes along their digestive tract. However, there is scarce genomic information about the microbiota that perform this degradation. This study...
3.
Oliver A, Podell S, Wegley Kelly L, Sparagon W, Plominsky A, Nelson R, et al.
bioRxiv
. 2023 Dec;
PMID: 38076955
Coastal herbivorous fishes consume macroalgae, which is then degraded by microbes along their digestive tract. However, there is scarce foundational genomic work on the microbiota that perform this degradation. This...
4.
Podell S, Oliver A, Wegley Kelly L, Sparagon W, Plominsky A, Nelson R, et al.
Appl Environ Microbiol
. 2023 May;
89(5):e0215422.
PMID: 37133385
Marine herbivorous fish that feed primarily on macroalgae, such as those from the genus are essential for maintaining coral health and abundance on tropical reefs. Here, deep metagenomic sequencing and...
5.
Wilson K, de Rond T, Burkhardt I, Steele T, Schafer R, Podell S, et al.
Proc Natl Acad Sci U S A
. 2023 Feb;
120(9):e2220934120.
PMID: 36802428
Sea sponges are the largest marine source of small-molecule natural products described to date. Sponge-derived molecules, such as the chemotherapeutic eribulin, the calcium-channel blocker manoalide, and antimalarial compound kalihinol A,...
6.
Minich J, Harer A, Vechinski J, Frable B, Skelton Z, Kunselman E, et al.
Nat Commun
. 2022 Nov;
13(1):6978.
PMID: 36396943
Fish are the most diverse and widely distributed vertebrates, yet little is known about the microbial ecology of fishes nor the biological and environmental factors that influence fish microbiota. To...
7.
Minich J, Nowak B, Elizur A, Knight R, Fielder S, Allen E
Front Mar Sci
. 2022 Oct;
8.
PMID: 36248701
The fish gut microbiome is impacted by a number of biological and environmental factors including fish feed formulations. Unlike mammals, vertical microbiome transmission is largely absent in fish and thus...
8.
Klau L, Podell S, Creamer K, Demko A, Singh H, Allen E, et al.
J Biol Chem
. 2022 Sep;
298(10):102480.
PMID: 36108739
The Natural Product Domain Seeker (NaPDoS) webtool detects and classifies ketosynthase (KS) and condensation domains from genomic, metagenomic, and amplicon sequence data. Unlike other tools, a phylogeny-based classification scheme is...
9.
Sparagon W, Gentry E, Minich J, Vollbrecht L, Laurens L, Allen E, et al.
Anim Microbiome
. 2022 May;
4(1):33.
PMID: 35606844
Background: Gut microorganisms aid in the digestion of food by providing exogenous metabolic pathways to break down organic compounds. An integration of longitudinal microbial and chemical data is necessary to...
10.
Kunselman E, Minich J, Horwith M, Gilbert J, Allen E
Microbiol Spectr
. 2022 May;
10(3):e0198221.
PMID: 35536036
The Olympia oyster () of the Puget Sound suffered a dramatic population crash, but restoration efforts hope to revive this native species. One overlooked variable in the process of assessing...