Efrem S Lim
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Explore the profile of Efrem S Lim including associated specialties, affiliations and a list of published articles.
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62
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1917
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Recent Articles
1.
Begnel E, Ojee E, Adhiambo J, Mabele E, Wandika B, Ogweno V, et al.
BMJ Glob Health
. 2025 Jan;
10(1.
PMID: 39828431
Background: Historically, children who are HIV-exposed, uninfected (CHEU) have been found to have greater morbidity and mortality than children who are HIV-unexposed, uninfected (CHUU). To assess whether this difference persists...
2.
Comba I, Mars R, Yang L, Dumais M, Chen J, Van Gorp T, et al.
bioRxiv
. 2024 Dec;
PMID: 39713288
Long COVID (LC), manifests in 10-30% of non-hospitalized individuals post-SARS-CoV-2 infection leading to significant morbidity. The predictive role of gut microbiome composition during acute infection in the development of LC...
3.
Cheshomi N, Alum A, Smith M, Lim E, Conroy-Ben O, Abbaszadegan M
Appl Environ Microbiol
. 2024 Dec;
91(1):e0133924.
PMID: 39641602
Viral detection methodologies used for wastewater-based epidemiology (WBE) studies have a broad range of efficacies. The complex matrix and low viral particle load in wastewater emphasize the importance of the...
4.
Maqsood R, Holland L, Wu L, Begnel E, Adhiambo J, Owiti P, et al.
Gut Microbes
. 2024 Aug;
16(1):2394248.
PMID: 39185682
Microbiome perturbations can have long-term effects on health. The dynamics of the gut microbiome and virome in women living with HIV (WLHIV) and their newborn infants is poorly understood. Here,...
5.
Do E, Holland S, Kaelin E, Mitchell C, Soria J, La Rosa A, et al.
Microbiol Resour Announc
. 2024 Aug;
13(9):e0058224.
PMID: 39101720
We identified and characterized seven anellovirus genome sequences in the female genital tract through virome metagenomic sequencing of cervicovaginal lavage specimens from women living with HIV in Peru. Phylogenetic and...
6.
Holland S, Smith M, Holland L, Maqsood R, Hu J, Murugan V, et al.
Sci Total Environ
. 2024 Jul;
948:174981.
PMID: 39053521
Areas of dense population congregation are prone to experience respiratory virus outbreaks. We monitored wastewater and clinic patients for the presence of respiratory viruses on a large, public university campus....
7.
Chung J, Shirk P, Gaglani M, Mutnal M, Nowalk M, Moehling Geffel K, et al.
Influenza Other Respir Viruses
. 2024 Jun;
18(6):e13342.
PMID: 38923314
Background: The 2022-23 US influenza season peaked early in fall 2022. Methods: Late-season influenza vaccine effectiveness (VE) against outpatient, laboratory-confirmed influenza was calculated among participants of the US Influenza VE...
8.
Maqsood R, Wu L, Brennan D, Lim E
Microbiol Spectr
. 2024 Jun;
12(8):e0405523.
PMID: 38916313
Importance: The urinary microbiome is increasingly implicated in renal health and disease. While most research focuses on bacteria communities of the microbiome, factors that influence the urinary virome are not...
9.
Maqsood R, Smith M, Holland L, Sullins R, Holland S, Tan M, et al.
Viruses
. 2024 May;
16(5).
PMID: 38793574
Influenza viruses are constantly evolving and are therefore monitored worldwide in the hope to reduce the burden of disease by annual updates to vaccine recommendations. We conducted genomic sequencing of...
10.
Seasonality of respiratory, enteric, and urinary viruses revealed by wastewater genomic surveillance
Smith M, Maqsood R, Sullins R, Driver E, Halden R, Lim E
mSphere
. 2024 May;
9(5):e0010524.
PMID: 38712930
Wastewater surveillance can reveal population-level infectious disease burden and emergent public health threats can be reliably assessed through wastewater surveillance. While molecular methods for wastewater monitoring of microorganisms have traditionally...