Dmitry N Ivankov
Overview
Explore the profile of Dmitry N Ivankov including associated specialties, affiliations and a list of published articles.
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Articles
33
Citations
878
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Recent Articles
1.
Zhegalova I, Ulianov S, Galitsyna A, Pletenev I, Tsoy O, Luzhin A, et al.
Nucleic Acids Res
. 2025 Jan;
53(2).
PMID: 39844457
Dictyostelium discoideum is a unicellular slime mold, developing into a multicellular fruiting body upon starvation. Development is accompanied by large-scale shifts in gene expression program, but underlying features of chromatin...
2.
Kazanov F, Matveev E, Ponomarev G, Ivankov D, Kazanov M
Sci Rep
. 2024 Nov;
14(1):28587.
PMID: 39562668
Recent advancements in experimental and computational methods for RNA secondary structure detection have revealed the crucial role of RNA structural elements in diverse molecular processes within living cells. It has...
3.
Melnik T, Majorina M, Vorobeva D, Nagibina G, Veselova V, Glukhova K, et al.
Cell Commun Signal
. 2024 Feb;
22(1):90.
PMID: 38303060
Enhancing protein stability holds paramount significance in biotechnology, therapeutics, and the food industry. Circular permutations offer a distinctive avenue for manipulating protein stability while keeping intra-protein interactions intact. Amidst the...
4.
Bulavko E, Pak M, Ivankov D
Biomolecules
. 2023 Aug;
13(8).
PMID: 37627334
The molecular toxicity of the uranyl ion (UO) in living cells is primarily determined by its high affinity to both native and potential metal-binding sites that commonly occur in the...
5.
Egorova T, Galkin I, Velyaev O, Vassilieva S, Savchenko I, Loginov V, et al.
Int J Mol Sci
. 2023 Jun;
24(11).
PMID: 37298068
Mutations that prevent the production of proteins in the gene cause Duchenne muscular dystrophy. Most frequently, these are deletions leading to reading-frame shift. The "reading-frame rule" states that deletions that...
6.
Finkelstein A, Bogatyreva N, Ivankov D, Garbuzynskiy S
Biophys Rev
. 2023 May;
15(2):161.
PMID: 37124919
No abstract available.
7.
Pak M, Markhieva K, Novikova M, Petrov D, Vorobyev I, Maksimova E, et al.
PLoS One
. 2023 Mar;
18(3):e0282689.
PMID: 36928239
AlphaFold changed the field of structural biology by achieving three-dimensional (3D) structure prediction from protein sequence at experimental quality. The astounding success even led to claims that the protein folding...
8.
Finkelstein A, Bogatyreva N, Ivankov D, Garbuzynskiy S
Biophys Rev
. 2023 Jan;
14(6):1255-1272.
PMID: 36659994
The ability of protein chains to spontaneously form their three-dimensional structures is a long-standing mystery in molecular biology. The most conceptual aspect of this mystery is how the protein chain...
9.
Best templates outperform homology models in predicting the impact of mutations on protein stability
Pak M, Ivankov D
Bioinformatics
. 2022 Jul;
38(18):4312-4320.
PMID: 35894930
Motivation: Prediction of protein stability change upon mutation (ΔΔG) is crucial for facilitating protein engineering and understanding of protein folding principles. Robust prediction of protein folding free energy change requires...
10.
Tsitrina A, Krasylov I, Maltsev D, Andreichenko I, Moskvina V, Ivankov D, et al.
Glycobiology
. 2021 May;
31(8):959-974.
PMID: 33978736
Elevated plasma levels of hyaluronic acid (HA) is a disease marker in liver pathology and other inflammatory disorders. Inhibition of HA synthesis with coumarin 4-methylumbelliferone (4MU) has a beneficial effect...