Daniel L Cameron
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Explore the profile of Daniel L Cameron including associated specialties, affiliations and a list of published articles.
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17
Citations
698
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Recent Articles
1.
Behera S, Catreux S, Rossi M, Truong S, Huang Z, Ruehle M, et al.
Nat Biotechnol
. 2024 Oct;
PMID: 39455800
Research and medical genomics require comprehensive, scalable methods for the discovery of novel disease targets, evolutionary drivers and genetic markers with clinical significance. This necessitates a framework to identify all...
2.
Behera S, Catreux S, Rossi M, Truong S, Huang Z, Ruehle M, et al.
bioRxiv
. 2024 Jan;
PMID: 38260545
Research and medical genomics require comprehensive and scalable solutions to drive the discovery of novel disease targets, evolutionary drivers, and genetic markers with clinical significance. This necessitates a framework to...
3.
Espejo Valle-Inclan J, Besselink N, de Bruijn E, Cameron D, Ebler J, Kutzera J, et al.
Cell Genom
. 2023 Feb;
2(6):100139.
PMID: 36778136
Accurate detection of somatic structural variation (SV) in cancer genomes remains a challenging problem. This is in part due to the lack of high-quality, gold-standard datasets that enable the benchmarking...
4.
Shale C, Cameron D, Baber J, Wong M, Cowley M, Papenfuss A, et al.
Cell Genom
. 2023 Feb;
2(4):100112.
PMID: 36776527
Complex somatic genomic rearrangements and copy number alterations are hallmarks of nearly all cancers. We have developed an algorithm, LINX, to aid interpretation of structural variant and copy number data...
5.
Wagner A, Babb L, Alterovitz G, Baudis M, Brush M, Cameron D, et al.
Cell Genom
. 2022 Mar;
1(2).
PMID: 35311178
Maximizing the personal, public, research, and clinical value of genomic information will require the reliable exchange of genetic variation data. We report here the Variation Representation Specification (VRS, pronounced "verse"),...
6.
Cameron D, Dong R, Papenfuss A
Bioinformatics
. 2022 Feb;
38(7):2046-2048.
PMID: 35134827
Summary: StructuralVariantAnnotation is an R/Bioconductor package that provides a framework for decoupling downstream analysis of structural variant breakpoints from upstream variant calling methods. It standardizes the representational format from BEDPE,...
7.
Rehm H, Page A, Smith L, Adams J, Alterovitz G, Babb L, et al.
Cell Genom
. 2022 Jan;
1(2).
PMID: 35072136
The Global Alliance for Genomics and Health (GA4GH) aims to accelerate biomedical advances by enabling the responsible sharing of clinical and genomic data through both harmonized data aggregation and federated...
8.
Mc Cartney A, Mahmoud M, Jochum M, Agustinho D, Zorman B, Al Khleifat A, et al.
F1000Res
. 2021 Oct;
10:246.
PMID: 34621504
In October 2020, 62 scientists from nine nations worked together remotely in the Second Baylor College of Medicine & DNAnexus hackathon, focusing on different related topics on Structural Variation, Pan-genomes,...
9.
Cameron D, Baber J, Shale C, Espejo Valle-Inclan J, Besselink N, Van Hoeck A, et al.
Genome Biol
. 2021 Jul;
22(1):202.
PMID: 34253237
GRIDSS2 is the first structural variant caller to explicitly report single breakends-breakpoints in which only one side can be unambiguously determined. By treating single breakends as a fundamental genomic rearrangement...
10.
Cameron D, Jacobs N, Roepman P, Priestley P, Cuppen E, Papenfuss A
Bioinformatics
. 2021 May;
37(19):3115-3119.
PMID: 33973999
Motivation: Integration of viruses into infected host cell DNA can cause DNA damage and disrupt genes. Recent cost reductions and growth of whole genome sequencing has produced a wealth of...