Cedric Notredame
Overview
Explore the profile of Cedric Notredame including associated specialties, affiliations and a list of published articles.
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Articles
93
Citations
10419
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Recent Articles
1.
Baltzis A, Santus L, Langer B, Magis C, de Vienne D, Gascuel O, et al.
Nat Commun
. 2025 Jan;
16(1):293.
PMID: 39814729
In a phylogeny, trustworthy reliability branch support estimates are as important as the tree itself. We show that reliability support values based on bootstrapping can be improved by combining sequence...
2.
Sasse A, Ray D, Laverty K, Tam C, Albu M, Zheng H, et al.
bioRxiv
. 2024 Oct;
PMID: 39464061
RNA-binding proteins (RBPs) are key regulators of gene expression. Here, we introduce EuPRI (Eukaryotic Protein-RNA Interactions) - a freely available resource of RNA motifs for 34,736 RBPs from 690 eukaryotes....
3.
Villanueva-Canas J, Fernandez-Fuentes N, Saul D, Kosinsky R, Teyssier C, Rogalska M, et al.
iScience
. 2024 Apr;
27(4):109584.
PMID: 38623337
Peptidyl arginine deiminases (PADIs) catalyze protein citrullination, a post-translational conversion of arginine to citrulline. The most widely expressed member of this family, PADI2, regulates cellular processes that impact several diseases....
4.
Santus L, Garriga E, Deorowicz S, Gudys A, Notredame C
Curr Opin Struct Biol
. 2023 Apr;
80:102577.
PMID: 37012200
Large-scale genomics requires highly scalable and accurate multiple sequence alignment methods. Results collected over this last decade suggest accuracy loss when scaling up over a few thousand sequences. This issue...
5.
Novotna Floriancicova K, Baltzis A, Smejkal J, Czernekova M, Kaczmarek L, Maly J, et al.
Sci Rep
. 2023 Mar;
13(1):5194.
PMID: 36997657
Tardigrades are microscopic ecdysozoans that can withstand extreme environmental conditions. Several tardigrade species undergo reversible morphological transformations and enter into cryptobiosis, which helps them to survive periods of unfavorable environmental...
6.
Cuypers B, Meysman P, Erb I, Bittremieux W, Valkenborg D, Baggerman G, et al.
PLoS Pathog
. 2022 Sep;
18(9):e1010848.
PMID: 36149920
Aneuploidy causes system-wide disruptions in the stochiometric balances of transcripts, proteins, and metabolites, often resulting in detrimental effects for the organism. The protozoan parasite Leishmania has an unusually high tolerance...
7.
Baltzis A, Mansouri L, Jin S, Langer B, Erb I, Notredame C
Bioinformatics
. 2022 Sep;
38(22):5007-5011.
PMID: 36130276
Motivation: Protein sequence alignments are essential to structural, evolutionary and functional analysis, but their accuracy is often limited by sequence similarity unless molecular structures are available. Protein structures predicted at...
8.
Guegan F, Rajan K, Bento F, Pinto-Neves D, Sequeira M, Guminska N, et al.
Sci Adv
. 2022 Jun;
8(24):eabn2706.
PMID: 35704590
The parasite causes African sleeping sickness that is fatal to patients if untreated. Parasite differentiation from a replicative slender form into a quiescent stumpy form promotes host survival and parasite...
9.
Fructuoso M, Espinosa-Carrasco J, Erb I, Notredame C, Dierssen M
Bio Protoc
. 2021 Mar;
9(14):e3308.
PMID: 33654818
Obesity is an important health problem with a strong environmental component that is acquiring pandemic proportion. The high availability of caloric dense foods promotes overeating potentially causing obesity. Animal models...
10.