Baoxing Song
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Explore the profile of Baoxing Song including associated specialties, affiliations and a list of published articles.
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Articles
32
Citations
342
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Recent Articles
1.
Feng H, Fan W, Liu M, Huang J, Li B, Sang Q, et al.
BMC Genomics
. 2025 Jan;
26(1):3.
PMID: 39754060
Background: The evolution and development of flowers are biologically essential and of broad interest. Maize and sorghum have similar morphologies and phylogeny while harboring different inflorescence architecture. The difference in...
2.
Wang D, Xiao S, Shu J, Luo L, Yang M, Calonje M, et al.
Genome Biol
. 2024 Dec;
25(1):324.
PMID: 39741350
Background: Promoters serve as key elements in the regulation of gene transcription. In mammals, loop interactions between promoters and enhancers increase the complexity of the promoter-based regulatory networks. However, the...
3.
Huang J, Jia Y, Pan Y, Lin H, Lv S, Nawaz M, et al.
Plant Cell Rep
. 2024 Oct;
43(11):254.
PMID: 39373738
The genomic organization, phylogenetic relationship, expression patterns, and genetic variations of m6A-related genes were systematically investigated in wild emmer wheat and the function of TdFIP37 regulating salt tolerance was preliminarily...
4.
Li T, Xu H, Teng S, Suo M, Bahitwa R, Xu M, et al.
Proc Natl Acad Sci U S A
. 2024 Jun;
121(26):e2319811121.
PMID: 38889146
Rational design of plant -regulatory DNA sequences without expert intervention or prior domain knowledge is still a daunting task. Here, we developed PhytoExpr, a deep learning framework capable of predicting...
5.
Cheng S, Feng C, Wingen L, Cheng H, Riche A, Jiang M, et al.
Nature
. 2024 Jun;
632(8026):823-831.
PMID: 38885696
Harnessing genetic diversity in major staple crops through the development of new breeding capabilities is essential to ensure food security. Here we examined the genetic and phenotypic diversity of the...
6.
Zhou H, Su X, Song B
BMC Genomics
. 2024 May;
25(1):515.
PMID: 38796435
Background: The short-read whole-genome sequencing (WGS) approach has been widely applied to investigate the genomic variation in the natural populations of many plant species. With the rapid advancements in long-read...
7.
Yang G, Pan Y, Pan W, Song Q, Zhang R, Tong W, et al.
New Phytol
. 2024 Feb;
242(5):2115-2131.
PMID: 38358006
Drought is one of the major environmental constraints for wheat production world-wide. As the progenitor and genetic reservoir of common wheat, emmer wheat is considered as an invaluable gene pool...
8.
Munasinghe M, Read A, Stitzer M, Song B, Menard C, Ma K, et al.
PLoS Genet
. 2023 Dec;
19(12):e1011086.
PMID: 38134220
Structural differences between genomes are a major source of genetic variation that contributes to phenotypic differences. Transposable elements, mobile genetic sequences capable of increasing their copy number and propagating themselves...
9.
Li H, Hua L, Zhao S, Hao M, Song R, Pang S, et al.
Nat Commun
. 2023 Sep;
14(1):6072.
PMID: 37770474
Leaf rust, caused by Puccinia triticina Eriksson (Pt), is one of the most severe foliar diseases of wheat. Breeding for leaf rust resistance is a practical and sustainable method to...
10.
Song B, Buckler E, Stitzer M
Trends Plant Sci
. 2023 Sep;
29(3):355-369.
PMID: 37749022
Genome alignment is one of the most foundational methods for genome sequence studies. With rapid advances in sequencing and assembly technologies, these newly assembled genomes present challenges for alignment tools...