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Anoop Rama Damodaran

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Articles 11
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Recent Articles
1.
Smithwick E, Bhagi-Damodaran A, Damodaran A
Methods Enzymol . 2024 Sep; 703:51-63. PMID: 39261003
Determination of substrate binding affinity (K) is critical to understanding enzyme function. An extensive number of methods have been developed and employed to study ligand/substrate binding, but the best approach...
2.
Windsor P, Ouyang H, G da Costa J, Damodaran A, Chen Y, Bhagi-Damodaran A
Angew Chem Int Ed Engl . 2024 Aug; 63(48):e202409234. PMID: 39168829
Cells have evolved intricate mechanisms for recognizing and responding to changes in oxygen (O) concentrations. Here, we have reprogrammed cellular hypoxia (low O) signaling via gas tunnel engineering of prolyl...
3.
Apiche E, Yee E, Damodaran A, Bhagi-Damodaran A
J Inorg Biochem . 2024 May; 257:112576. PMID: 38761578
DosT and DosS are heme-based kinases involved in sensing and signaling O tension in the microenvironment of Mycobacterium tuberculosis (Mtb). Under conditions of low O, they activate >50 dormancy-related genes...
4.
Smithwick E, Bhagi-Damodaran A, Damodaran A
bioRxiv . 2024 Apr; PMID: 38617253
Determination of substrate binding affinity () is critical to understanding enzyme function. An extensive number of methods have been developed and employed to study ligand/substrate binding, but the best approach...
5.
Apiche E, Yee E, Damodaran A, Bhagi-Damodaran A
bioRxiv . 2024 Mar; PMID: 38464195
DosT and DosS are heme-based kinases involved in sensing and signaling O tension in the microenvironment of (). Under conditions of low O, they activate >50 dormancy-related genes and play...
6.
Larson G, Windsor P, Smithwick E, Shi K, Aihara H, Damodaran A, et al.
Biochemistry . 2023 Oct; 62(22):3283-3292. PMID: 37905955
DosS is a heme-containing histidine kinase that triggers dormancy transformation in. Sequence comparison of the catalytic ATP-binding (CA) domain of DosS to other well-studied histidine kinases reveals a short ATP-lid....
7.
Windsor P, Ouyang H, G da Costa J, Damodaran A, Chen Y, Bhagi-Damodaran A
bioRxiv . 2023 Aug; PMID: 37609209
Cells have evolved intricate mechanisms for recognizing and responding to changes in oxygen (O) concentrations. Here, we have reprogrammed cellular hypoxia (low O) signaling via gas tunnel engineering of prolyl...
8.
Larson G, Windsor P, Smithwick E, Shi K, Aihara H, Damodaran A, et al.
bioRxiv . 2023 Jul; PMID: 37398500
DosS is a heme-sensor histidine kinase that responds to redox-active stimuli in mycobacterial environments by triggering dormancy transformation. Sequence comparison of the catalytic ATP-binding (CA) domain of DosS to other...
9.
Williams M, Yee E, Larson G, Apiche E, Damodaran A, Bhagi-Damodaran A
Curr Opin Chem Biol . 2023 Jun; 76:102331. PMID: 37311385
Microbes utilize numerous metal cofactor-containing proteins to recognize and respond to constantly fluctuating redox stresses in their environment. Gaining an understanding of how these metalloproteins sense redox events, and how...
10.
Smithwick E, Hunter Wilson R, Chatterjee S, Pu Y, Dalluge J, Damodaran A, et al.
bioRxiv . 2023 Jun; PMID: 37292651
Non-heme iron halogenases (NHFe-Hals) catalyze the direct insertion of a chloride/bromide ion at an unactivated carbon position using a high-valent haloferryl intermediate. Despite more than a decade of structural and...