Andrew J Severin
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Explore the profile of Andrew J Severin including associated specialties, affiliations and a list of published articles.
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Articles
36
Citations
1473
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Recent Articles
1.
Kwon K, Masonbrink R, Maier T, Gardner M, Severin A, Baum T, et al.
Phytopathology
. 2024 Jul;
114(10):2341-2350.
PMID: 38976643
Soybean cyst nematode (SCN, ) is most effectively managed through planting resistant soybean cultivars, but the repeated use of the same resistance sources has led to a widespread emergence of...
2.
Martinez L, Zattara E, Arbetman M, Morales C, Masonbrink R, Severin A, et al.
Genome Biol Evol
. 2024 Jul;
16(7).
PMID: 38973368
This article describes a genome assembly and annotation for Bombus dahlbomii, the giant Patagonian bumble bee. DNA from a single, haploid male collected in Argentina was used for PacBio (HiFi)...
3.
Masonbrink R, Maier T, Muppirala U, Seetharam A, Lord E, Juvale P, et al.
BMC Genomics
. 2024 May;
25(1):537.
PMID: 38822236
No abstract available.
4.
McElroy K, Masonbrink R, Chudalayandi S, Severin A, Serb J
G3 (Bethesda)
. 2024 May;
14(9).
PMID: 38805695
The bivalve subclass Pteriomorphia, which includes the economically important scallops, oysters, mussels, and ark clams, exhibits extreme ecological, morphological, and behavioral diversity. Among this diversity are five morphologically distinct eye...
5.
Sharma S, Purcell C, Hyde J, Severin A
Int J Syst Evol Microbiol
. 2024 Jan;
74(1).
PMID: 38179990
A fully assembled spirochaete genome was identified as a contaminating scaffold in our red abalone () genome assembly. In this paper, we describe the analysis of this bacterial genome. The...
6.
Chang J, Stahlke A, Chudalayandi S, Rosen B, Childers A, Severin A
Genome Biol Evol
. 2023 Feb;
15(3).
PMID: 36792366
Long-read sequencing has revolutionized genome assembly, yielding highly contiguous, chromosome-level contigs. However, assemblies from some third generation long read technologies, such as Pacific Biosciences (PacBio) continuous long reads (CLR), have...
7.
Sahoo D, Borcherding D, Chandra L, Jergens A, Atherly T, Bourgois-Mochel A, et al.
Cancers (Basel)
. 2022 Jul;
14(14).
PMID: 35884586
Lipopolysaccharide (LPS) is associated with chronic intestinal inflammation and promotes intestinal cancer progression in the gut. While the interplay between LPS and intestinal immune cells has been well-characterized, little is...
8.
Murugan K, Suresh S, Seetharam A, Severin A, Sashital D
Nucleic Acids Res
. 2021 Mar;
49(7):4037-4053.
PMID: 33744974
Cas9 is an RNA-guided endonuclease in the bacterial CRISPR-Cas immune system and a popular tool for genome editing. The commonly used Streptococcus pyogenes Cas9 (SpCas9) is relatively non-specific and prone...
9.
Shell W, Steffen M, Pare H, Seetharam A, Severin A, Toth A, et al.
Commun Biol
. 2021 Feb;
4(1):253.
PMID: 33637860
While it is well known that the genome can affect social behavior, recent models posit that social lifestyles can, in turn, influence genome evolution. Here, we perform the most phylogenetically...
10.
Wu H, Gontarek B, Yi G, Beall B, Neelakandan A, Adhikari B, et al.
Plant Physiol
. 2020 Aug;
184(2):960-972.
PMID: 32737073
Maize () () mutants form multiple aleurone layers in the endosperm and have arrested embryogenesis. Prior studies suggest that functions downstream of () in a regulatory pathway that controls aleurone...