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Andrea Vavrinska

Explore the profile of Andrea Vavrinska including associated specialties, affiliations and a list of published articles. Areas
Snapshot
Articles 5
Citations 5
Followers 0
Related Specialties
Molecular Biology
Nuclear Medicine
Chemistry
Top 10 Co-Authors
Rolf Boelens
Vladimir Sychrovsky
Lukas Trantirek
Radovan Fiala
Vladimir Sklenar
Jiri Zelinka
Jakub Sebera
Nicolas Coudevylle
Karin Kloiber
Ilektra-Chara Giassa
Published In
J Biomol NMR
J Am Chem Soc
Chempluschem
Affiliations
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Recent Articles
1.
HERMES - A Software Tool for the Prediction and Analysis of Magnetic-Field-Induced Residual Dipolar Couplings in Nucleic Acids
Giassa I, Vavrinska A, Zelinka J, Sebera J, Sychrovsky V, Boelens R, et al.
Chempluschem . 2020 Sep; 85(9):2177-2185. PMID: 32986260
Field-Induced Residual Dipolar Couplings (fiRDC) are a valuable source of long-range information on structure of nucleic acids (NA) in solution. A web application (HERMES) was developed for structure-based prediction and...
2.
Erratum to: Impact of nucleic acid self-alignment in a strong magnetic field on the interpretation of indirect spin-spin interactions
Vavrinska A, Zelinka J, Sebera J, Sychrovsky V, Fiala R, Boelens R, et al.
J Biomol NMR . 2016 May; 65(1):49. PMID: 27215413
No abstract available.
3.
Impact of nucleic acid self-alignment in a strong magnetic field on the interpretation of indirect spin-spin interactions
Vavrinska A, Zelinka J, Sebera J, Sychrovsky V, Fiala R, Boelens R, et al.
J Biomol NMR . 2015 Dec; 64(1):53-62. PMID: 26685997
Heteronuclear and homonuclear direct (D) and indirect (J) spin-spin interactions are important sources of structural information about nucleic acids (NAs). The Hamiltonians for the D and J interactions have the...
4.
Influence of the O-phosphorylation of serine, threonine and tyrosine in proteins on the amidic ¹⁵N chemical shielding anisotropy tensors
Emmer J, Vavrinska A, Sychrovsky V, Benda L, Kriz Z, Koca J, et al.
J Biomol NMR . 2012 Dec; 55(1):59-70. PMID: 23202985
Density functional theory was employed to study the influence of O-phosphorylation of serine, threonine, and tyrosine on the amidic (15)N chemical shielding anisotropy (CSA) tensor in the context of the...
5.
Pharmacophore mapping via cross-relaxation during adiabatic fast passage
Auer R, Kloiber K, Vavrinska A, Geist L, Coudevylle N, Konrat R
J Am Chem Soc . 2010 Jan; 132(5):1480-1. PMID: 20078057
A novel NMR method is demonstrated for the investigation of protein ligand interactions. In this approach an adiabatic fast passage pulse, i.e. a long, weak pulse with a linear frequency...