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Andrea Rachinger

Explore the profile of Andrea Rachinger including associated specialties, affiliations and a list of published articles. Areas
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Recent Articles
1.
Rachinger A, Kootstra N, Gijsbers E, van den Kerkhof T, Schuitemaker H, van t Wout A
AIDS . 2012 May; 26(12):1517-22. PMID: 22555160
Objective: Recent studies have suggested that the dynamics of HIV-1 evolutionary rate reflect the rate of disease progression. We wished to determine whether viral diversity early in infection is predictive...
2.
Edo-Matas D, Rachinger A, Setiawan L, Boeser-Nunnink B, van t Wout A, Lemey P, et al.
Virology . 2011 Nov; 422(1):70-80. PMID: 22047989
To trace the evolutionary patterns underlying evolution of coreceptor use within a host, we studied an HIV-1 transmission pair involving a donor who exclusively harbored CCR5-using (R5) variants throughout his...
3.
Rachinger A, Manyenga P, Burger J, Derks van de Ven T, Stolte I, Prins M, et al.
J Infect Dis . 2011 May; 203(11):1621-8. PMID: 21592992
Background: Human immunodeficiency virus type 1 (HIV-1) superinfection is infection of an HIV-1 seropositive individual with another HIV-1 strain. The rate at which HIV-1 superinfection occurs might be influenced by...
4.
Rachinger A, Groeneveld P, van Assen S, Lemey P, Schuitemaker H
AIDS . 2011 Apr; 25(8):1035-9. PMID: 21505318
Objective: To investigate whether time-measured phylogenetic analysis of longitudinal viral sequences can establish the direction and timing of HIV-1 transmission in an epidemiologically linked transmission cluster of three homosexual men....
5.
Edo-Matas D, van Gils M, Bowles E, Navis M, Rachinger A, Boeser-Nunnink B, et al.
Virology . 2010 Jul; 405(2):492-504. PMID: 20638697
The HIV-1 quasispecies in peripheral blood mononuclear cells (PBMC) is considered to be a mix of actively replicating, latent, and archived viruses and may be genetically distinct from HIV-1 variants...
6.
Rachinger A, Stolte I, van de Ven T, Burger J, Prins M, Schuitemaker H, et al.
Clin Infect Dis . 2010 Apr; 50(9):1309-15. PMID: 20367230
Background: Incidence rates of human immunodeficiency virus type 1 (HIV-1) superinfection differ among cohorts and, as yet, only 2 cohorts of homosexual men have been screened. Here, we investigated the...
7.
Rachinger A, van de Ven T, Burger J, Schuitemaker H, van t Wout A
J Virol Methods . 2010 Feb; 165(2):311-7. PMID: 20178816
The aim of this study was to compare sensitivity thresholds of two pre-screening methods - the heteroduplex mobility assay (HMA) and the presence of ambiguity codes in population-based sequences -...
8.
Rachinger A, Navis M, van Assen S, Groeneveld P, Schuitemaker H
Clin Infect Dis . 2008 Oct; 47(11):e86-9. PMID: 18947331
A human immunodeficiency virus type 1 (HIV-1)-infected elite controller (defined as an untreated HIV-1-infected person with a plasma HIV-1 RNA level <50 copies/mL for at least 12 months) who experienced...
9.
Bragoszewski P, Kupryjanczyk J, Bartnik E, Rachinger A, Ostrowski J
BMC Cancer . 2008 Oct; 8:292. PMID: 18842121
Background: In recent years, numerous studies have investigated somatic mutations in mitochondrial DNA in various tumours. The observed high mutation rates might reflect mitochondrial deregulation; consequently, mutation analyses could be...
10.
Navis M, Matas D, Rachinger A, Koning F, Swieten P, Kootstra N, et al.
PLoS One . 2008 Jun; 3(6):e2422. PMID: 18560583
Background: To address evolution of HIV-1 after transmission, we studied sequence dynamics in and outside predicted epitopes of cytotoxic T lymphocytes (CTL) in subtype B HIV-1 variants that were isolated...