Aleksandra B Rakhmaninova
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Explore the profile of Aleksandra B Rakhmaninova including associated specialties, affiliations and a list of published articles.
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6
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196
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Recent Articles
1.
Ravcheev D, Khoroshkin M, Laikova O, Tsoy O, Sernova N, Petrova S, et al.
Front Microbiol
. 2014 Jun;
5:294.
PMID: 24966856
DNA-binding transcription factors (TFs) are essential components of transcriptional regulatory networks in bacteria. LacI-family TFs (LacI-TFs) are broadly distributed among certain lineages of bacteria. The majority of characterized LacI-TFs sense...
2.
Mazin P, Gelfand M, Mironov A, Rakhmaninova A, Rubinov A, Russell R, et al.
Algorithms Mol Biol
. 2010 Jul;
5:29.
PMID: 20633297
Background: Recent progress in sequencing and 3 D structure determination techniques stimulated development of approaches aimed at more precise annotation of proteins, that is, prediction of exact specificity to a...
3.
Kalinina O, Novichkov P, Mironov A, Gelfand M, Rakhmaninova A
Nucleic Acids Res
. 2004 Jun;
32(Web Server issue):W424-8.
PMID: 15215423
SDPpred (Specificity Determining Position prediction) is a tool for prediction of residues in protein sequences that determine the proteins' functional specificity. It is designed for analysis of protein families whose...
4.
Kalinina O, Mironov A, Gelfand M, Rakhmaninova A
Protein Sci
. 2004 Jan;
13(2):443-56.
PMID: 14739328
The increasing volume of genomic data opens new possibilities for analysis of protein function. We introduce a method for automated selection of residues that determine the functional specificity of proteins...
5.
Kalinina O, Makeev V, Sutormin R, Gelfand M, Rakhmaninova A
In Silico Biol
. 2003 Oct;
3(1-2):197-204.
PMID: 14524337
Transmembrane transport is an essential component of the cell life. Many genes encoding known or putative transport proteins are found in bacterial genomes. In most cases their substrate specificity is...
6.
Sutormin R, Rakhmaninova A, Gelfand M
Proteins
. 2003 Feb;
51(1):85-95.
PMID: 12596266
Aligned amino acid sequences of three functionally independent samples of transmembrane (TM) transport proteins have been analyzed. The concept of TM-kernel is proposed as the most probable transmembrane region of...