Abel Ureta-Vidal
Overview
Explore the profile of Abel Ureta-Vidal including associated specialties, affiliations and a list of published articles.
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14
Citations
8033
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Recent Articles
1.
Heilig R, Eckenberg R, Petit J, Fonknechten N, Da Silva C, Cattolico L, et al.
Nature
. 2023 Jul;
620(7973):E17.
PMID: 37491470
No abstract available.
2.
Severin J, Beal K, Vilella A, Fitzgerald S, Schuster M, Gordon L, et al.
BMC Bioinformatics
. 2010 May;
11:240.
PMID: 20459813
Background: The Ensembl project produces updates to its comparative genomics resources with each of its several releases per year. During each release cycle approximately two weeks are allocated to generate...
3.
Wilkinson P, Sengerova J, Matteoni R, Chen C, Soulat G, Ureta-Vidal A, et al.
Nucleic Acids Res
. 2009 Sep;
38(Database issue):D570-6.
PMID: 19783817
The laboratory mouse is the premier animal model for studying human disease and thousands of mutants have been identified or produced, most recently through gene-specific mutagenesis approaches. High throughput strategies...
4.
Vilella A, Severin J, Ureta-Vidal A, Heng L, Durbin R, Birney E
Genome Res
. 2008 Nov;
19(2):327-35.
PMID: 19029536
We have developed a comprehensive gene orientated phylogenetic resource, EnsemblCompara GeneTrees, based on a computational pipeline to handle clustering, multiple alignment, and tree generation, including the handling of large gene...
5.
Ruan J, Li H, Chen Z, Coghlan A, Coin L, Guo Y, et al.
Nucleic Acids Res
. 2007 Dec;
36(Database issue):D735-40.
PMID: 18056084
TreeFam (http://www.treefam.org) was developed to provide curated phylogenetic trees for all animal gene families, as well as orthologue and paralogue assignments. Release 4.0 of TreeFam contains curated trees for 1314...
6.
Birney E, Stamatoyannopoulos J, Dutta A, Guigo R, Gingeras T, Margulies E, et al.
Nature
. 2007 Jun;
447(7146):799-816.
PMID: 17571346
We report the generation and analysis of functional data from multiple, diverse experiments performed on a targeted 1% of the human genome as part of the pilot phase of the...
7.
Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome
Margulies E, Cooper G, Asimenos G, Thomas D, Dewey C, Siepel A, et al.
Genome Res
. 2007 Jun;
17(6):760-74.
PMID: 17567995
A key component of the ongoing ENCODE project involves rigorous comparative sequence analyses for the initially targeted 1% of the human genome. Here, we present orthologous sequence generation, alignment, and...
8.
Birney E, Andrews T, Bevan P, Caccamo M, Chen Y, Clarke L, et al.
Genome Res
. 2004 Apr;
14(5):925-8.
PMID: 15078858
Ensembl (http://www.ensembl.org/) is a bioinformatics project to organize biological information around the sequences of large genomes. It is a comprehensive source of stable automatic annotation of individual genomes, and of...
9.
Gibbs R, Weinstock G, Metzker M, Muzny D, Sodergren E, Scherer S, et al.
Nature
. 2004 Apr;
428(6982):493-521.
PMID: 15057822
The laboratory rat (Rattus norvegicus) is an indispensable tool in experimental medicine and drug development, having made inestimable contributions to human health. We report here the genome sequence of the...
10.
Porcel B, Delfour O, Castelli V, de Berardinis V, Friedlander L, Cruaud C, et al.
Genome Res
. 2004 Feb;
14(3):463-71.
PMID: 14962985
A collection of 90,000 human cDNA clones generated to increase the fraction of "full-length" cDNAs available was analyzed by sequence alignment on the human genome assembly. Five hundred fifty-two gene...