A Kolinski
Overview
Explore the profile of A Kolinski including associated specialties, affiliations and a list of published articles.
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Articles
61
Citations
972
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Recent Articles
1.
Kouza M, Banerji A, Kolinski A, Buhimschi I, Kloczkowski A
Phys Chem Chem Phys
. 2017 Jan;
19(4):2990-2999.
PMID: 28079198
Preeclampsia, a pregnancy-specific disorder, shares typical pathophysiological features with protein misfolding disorders including Alzheimer's disease. Characteristic for preeclampsia is the involvement of multiple proteins of which fragments of SERPINA1 and...
2.
Saraswathi S, Fernandez-Martinez J, Kolinski A, Jernigan R, Kloczkowski A
J Mol Model
. 2013 Aug;
19(10):4337-48.
PMID: 23907551
Exponential growth in the number of available protein sequences is unmatched by the slower growth in the number of structures. As a result, the development of efficient and fast protein...
3.
Saraswathi S, Fernandez-Martinez J, Kolinski A, Jernigan R, Kloczkowski A
J Mol Model
. 2012 May;
18(9):4275-89.
PMID: 22562230
Computational methods are rapidly gaining importance in the field of structural biology, mostly due to the explosive progress in genome sequencing projects and the large disparity between the number of...
4.
Fetrow J, Giammona A, Kolinski A, Skolnick J
Curr Pharm Biotechnol
. 2002 Dec;
3(4):329-47.
PMID: 12463416
Protein folding, the problem of how an amino acid sequence folds into a unique three-dimensional shape, has been a long-standing problem in biology. The success of genome-wide sequencing efforts has...
5.
Skolnick J, Kolinski A, Kihara D, Betancourt M, ROTKIEWICZ P, Boniecki M
Proteins
. 2002 Feb;
Suppl 5:149-56.
PMID: 11835492
A combination of sequence comparison, threading, lattice, and off-lattice Monte Carlo (MC) simulations and clustering of MC trajectories was used to predict the structure of all (but one) targets of...
6.
Bujnicki J, ROTKIEWICZ P, Kolinski A, Rychlewski L
Protein Eng
. 2001 Dec;
14(10):717-21.
PMID: 11739889
Using a recent version of the SICHO algorithm for in silico protein folding, we made a blind prediction of the tertiary structure of the N-terminal, independently folded, catalytic domain (CD)...
7.
Kihara D, Lu H, Kolinski A, Skolnick J
Proc Natl Acad Sci U S A
. 2001 Aug;
98(18):10125-30.
PMID: 11504922
The successful prediction of protein structure from amino acid sequence requires two features: an efficient conformational search algorithm and an energy function with a global minimum in the native state....
8.
ROTKIEWICZ P, Sicinska W, Kolinski A, DeLuca H
Proteins
. 2001 Jul;
44(3):188-99.
PMID: 11455592
Comparative modeling of the vitamin D receptor three-dimensional structure and computational docking of 1alpha,25-dihydroxyvitamin D(3) into the putative binding pocket of the two deletion mutant receptors: (207-423) and (120-422, Delta...
9.
Kolinski A, Betancourt M, Kihara D, ROTKIEWICZ P, Skolnick J
Proteins
. 2001 Jun;
44(2):133-49.
PMID: 11391776
An improved generalized comparative modeling method, GENECOMP, for the refinement of threading models is developed and validated on the Fischer database of 68 probe-template pairs, a standard benchmark used to...
10.
Sikorski A, Kolinski A, Skolnick J
Acta Pol Pharm
. 2001 Apr;
57 Suppl:119-21.
PMID: 11293239
No abstract available.