» Articles » PMID: 8594611

The RNA Modification Database

Overview
Specialty Biochemistry
Date 1996 Jan 1
PMID 8594611
Citations 8
Authors
Affiliations
Soon will be listed here.
Abstract

The RNA modification database provides a comprehensive listing of post-transcriptionally modified nucleosides from RNA and is maintained as an updated version of the initial printed report. Information provided includes: type(s) of RNA in which found and phylogenetic distribution; common chemical names and symbols; Chemical Abstracts registry numbers and index names; chemical structures; initial literature citations for structural characterization or occurrence and chemical synthesis. The data are available through the World Wide Web, anonymous ftp or from the authors in printed form.

Citing Articles

Fifty years of Nucleic Acids Research.

Sale J, Stoddard B Nucleic Acids Res. 2024; 52(1):1-3.

PMID: 38178306 PMC: 10783492. DOI: 10.1093/nar/gkad1156.


Nanopore Dwell Time Analysis Permits Sequencing and Conformational Assignment of Pseudouridine in SARS-CoV-2.

Fleming A, Mathewson N, Howpay Manage S, Burrows C ACS Cent Sci. 2021; 7(10):1707-1717.

PMID: 34729414 PMC: 8554835. DOI: 10.1021/acscentsci.1c00788.


m6A-Driver: Identifying Context-Specific mRNA m6A Methylation-Driven Gene Interaction Networks.

Zhang S, Zhang S, Liu L, Meng J, Huang Y PLoS Comput Biol. 2016; 12(12):e1005287.

PMID: 28027310 PMC: 5226821. DOI: 10.1371/journal.pcbi.1005287.


The 2011 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection.

Galperin M, Cochrane G Nucleic Acids Res. 2010; 39(Database issue):D1-6.

PMID: 21177655 PMC: 3013748. DOI: 10.1093/nar/gkq1243.


Transglycosylation: a mechanism for RNA modification (and editing?).

Garcia G, Kittendorf J Bioorg Chem. 2005; 33(3):229-51.

PMID: 15888313 PMC: 2802272. DOI: 10.1016/j.bioorg.2005.01.001.


References
1.
Schweizer M, CHHEDA G, Baczynskyj L, Hall R . Aminoacyl nucleosides. VII. N-(Purin-6-ylcarbamoyl)threonine. A new component of transfer ribonucleic acid. Biochemistry. 1969; 8(8):3283-9. DOI: 10.1021/bi00836a023. View

2.
Limbach P, Crain P, McCloskey J . Summary: the modified nucleosides of RNA. Nucleic Acids Res. 1994; 22(12):2183-96. PMC: 523672. DOI: 10.1093/nar/22.12.2183. View

3.
Bjork G, Ericson J, Gustafsson C, Hagervall T, Jonsson Y, Wikstrom P . Transfer RNA modification. Annu Rev Biochem. 1987; 56:263-87. DOI: 10.1146/annurev.bi.56.070187.001403. View

4.
Chheda G, Hong C . Synthesis of naturally occurring 6-ureidopurines and their nucleosides. J Med Chem. 1971; 14(8):748-53. DOI: 10.1021/jm00290a019. View