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Fast DNA Isolation from Histoplasma Capsulatum: Methodology for Arbitrary Primer Polymerase Chain Reaction-based Epidemiological and Clinical Studies

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Specialty Microbiology
Date 1993 Feb 1
PMID 8432840
Citations 23
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Abstract

The arbitrary primer polymerase chain reaction (also called random amplified polymorphic DNA, or RAPD) is a DNA fingerprinting method that provides an efficient, sensitive way of discriminating between independent isolates of Histoplasma capsulatum, but its widespread application has been hampered by the arduous 2-day procedure traditionally used to extract DNA from H. capsulatum. We present here a quick (approximately 2-h) extraction method and show that the resultant DNA is suitable for sensitive and reproducible identification of individual strains of this pathogenic fungus.

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References
1.
G Williams J, Kubelik A, Livak K, Rafalski J, Tingey S . DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 1990; 18(22):6531-5. PMC: 332606. DOI: 10.1093/nar/18.22.6531. View

2.
Welsh J, McClelland M . Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res. 1990; 18(24):7213-8. PMC: 332855. DOI: 10.1093/nar/18.24.7213. View

3.
Eissenberg L, West J, Woods J, Goldman W . Infection of P388D1 macrophages and respiratory epithelial cells by Histoplasma capsulatum: selection of avirulent variants and their potential role in persistent histoplasmosis. Infect Immun. 1991; 59(5):1639-46. PMC: 257896. DOI: 10.1128/iai.59.5.1639-1646.1991. View

4.
Eissenberg L, Goldman W . Histoplasma variation and adaptive strategies for parasitism: new perspectives on histoplasmosis. Clin Microbiol Rev. 1991; 4(4):411-21. PMC: 358209. DOI: 10.1128/CMR.4.4.411. View

5.
Keath E, Kobayashi G, Medoff G . Typing of Histoplasma capsulatum by restriction fragment length polymorphisms in a nuclear gene. J Clin Microbiol. 1992; 30(8):2104-7. PMC: 265451. DOI: 10.1128/jcm.30.8.2104-2107.1992. View