Wen Y, Guo W, Meng C, Yang J, Xu S, Chen H
Nucleic Acids Res. 2024; 52(18):11083-11097.
PMID: 39268585
PMC: 11472151.
DOI: 10.1093/nar/gkae784.
Zhong Q, Liao B, Liu J, Shen W, Wang J, Wei L
Proc Natl Acad Sci U S A. 2024; 121(16):e2319790121.
PMID: 38593079
PMC: 11032452.
DOI: 10.1073/pnas.2319790121.
Hasani S, Ghafouri E, Kouhpayeh S, Amerizadeh F, Rahimmanesh I, Amirkhani Z
Heliyon. 2023; 9(9):e19925.
PMID: 37809683
PMC: 10559356.
DOI: 10.1016/j.heliyon.2023.e19925.
Georjon H, Bernheim A
Nat Rev Microbiol. 2023; 21(10):686-700.
PMID: 37460672
DOI: 10.1038/s41579-023-00934-x.
Gao Z, Feng Y
Front Microbiol. 2023; 14:1211793.
PMID: 37362940
PMC: 10286901.
DOI: 10.3389/fmicb.2023.1211793.
Alternative Z-genome biosynthesis pathway shows evolutionary progression from Archaea to phage.
Tong Y, Wu X, Liu Y, Chen H, Zhou Y, Jiang L
Nat Microbiol. 2023; 8(7):1330-1338.
PMID: 37308591
DOI: 10.1038/s41564-023-01410-1.
Landscape of New Nuclease-Containing Antiphage Systems in Escherichia coli and the Counterdefense Roles of Bacteriophage T4 Genome Modifications.
Wang S, Sun E, Liu Y, Yin B, Zhang X, Li M
J Virol. 2023; 97(6):e0059923.
PMID: 37306585
PMC: 10308915.
DOI: 10.1128/jvi.00599-23.
Proteomic Study of the Interactions between Phages and the Bacterial Host .
Bleriot I, Blasco L, Pacios O, Fernandez-Garcia L, Lopez M, Ortiz-Cartagena C
Microbiol Spectr. 2023; :e0397422.
PMID: 36877024
PMC: 10100988.
DOI: 10.1128/spectrum.03974-22.
A novel T4- and λ-based receptor binding protein family for bacteriophage therapy host range engineering.
Magaziner S, Salmond G
Front Microbiol. 2022; 13:1010330.
PMID: 36386655
PMC: 9659904.
DOI: 10.3389/fmicb.2022.1010330.
Recent Advances on DNA Base Flipping: A General Mechanism for Writing, Reading, and Erasing DNA Modifications.
Ren R, Horton J, Hong S, Cheng X
Adv Exp Med Biol. 2022; 1389:295-315.
PMID: 36350515
PMC: 9711002.
DOI: 10.1007/978-3-031-11454-0_12.
The DNA polymerase of bacteriophage YerA41 replicates its T-modified DNA in a primer-independent manner.
Gomez-Raya-Vilanova M, Leskinen K, Bhattacharjee A, Virta P, Rosenqvist P, Smith J
Nucleic Acids Res. 2022; 50(7):3985-3997.
PMID: 35357498
PMC: 9023294.
DOI: 10.1093/nar/gkac203.
Hypermodified DNA in Viruses of E. coli and Salmonella.
Hutinet G, Lee Y, de Crecy-Lagard V, Weigele P
EcoSal Plus. 2021; 9(2):eESP00282019.
PMID: 34910575
PMC: 11163837.
DOI: 10.1128/ecosalplus.ESP-0028-2019.
A postreplicative C5-cytosine hypermodification triggered by bacteriophage methyltransferase and hydroxylase.
Chen T, Chang W
Proc Natl Acad Sci U S A. 2021; 118(28).
PMID: 34215668
PMC: 8285969.
DOI: 10.1073/pnas.2109992118.
The Human Gut Phageome: Origins and Roles in the Human Gut Microbiome.
Townsend E, Kelly L, Muscatt G, Box J, Hargraves N, Lilley D
Front Cell Infect Microbiol. 2021; 11:643214.
PMID: 34150671
PMC: 8213399.
DOI: 10.3389/fcimb.2021.643214.
Rekindling of a Masterful Precedent; Bacteriophage: Reappraisal and Future Pursuits.
Abd-Allah I, El-Housseiny G, Yahia I, Aboshanab K, Hassouna N
Front Cell Infect Microbiol. 2021; 11:635597.
PMID: 34136415
PMC: 8201069.
DOI: 10.3389/fcimb.2021.635597.
Identification of Natural CRISPR Systems and Targets in the Human Microbiome.
Munch P, Franzosa E, Stecher B, McHardy A, Huttenhower C
Cell Host Microbe. 2020; 29(1):94-106.e4.
PMID: 33217332
PMC: 7813156.
DOI: 10.1016/j.chom.2020.10.010.
Detection of preQ0 deazaguanine modifications in bacteriophage CAjan DNA using Nanopore sequencing reveals same hypermodification at two distinct DNA motifs.
Kot W, Olsen N, Nielsen T, Hutinet G, de Crecy-Lagard V, Cui L
Nucleic Acids Res. 2020; 48(18):10383-10396.
PMID: 32941607
PMC: 7544227.
DOI: 10.1093/nar/gkaa735.
Covalent Modifications of the Bacteriophage Genome Confer a Degree of Resistance to Bacterial CRISPR Systems.
Liu Y, Dai L, Dong J, Chen C, Zhu J, Rao V
J Virol. 2020; 94(23).
PMID: 32938767
PMC: 7654273.
DOI: 10.1128/JVI.01630-20.
Phages and their potential to modulate the microbiome and immunity.
Federici S, Nobs S, Elinav E
Cell Mol Immunol. 2020; 18(4):889-904.
PMID: 32901128
PMC: 8115240.
DOI: 10.1038/s41423-020-00532-4.
Synthetic Life with Alternative Nucleic Acids as Genetic Materials.
Nie P, Bai Y, Mei H
Molecules. 2020; 25(15).
PMID: 32751873
PMC: 7435384.
DOI: 10.3390/molecules25153483.